PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_14.126
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family ERF
Protein Properties Length: 399aa    MW: 44653 Da    PI: 4.3653
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_14.126genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-194291255
                           AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  evm.model.supercontig_14.126 42 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 91
                                  789******.7*********33....35**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.87E-314198No hitNo description
Gene3DG3DSA:3.30.730.102.1E-274298IPR001471AP2/ERF domain
PfamPF008479.8E-144291IPR001471AP2/ERF domain
PROSITE profilePS5103219.5594299IPR001471AP2/ERF domain
SMARTSM003804.6E-3542105IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-194299IPR016177DNA-binding domain
PRINTSPR003675.7E-84354IPR001471AP2/ERF domain
PRINTSPR003675.7E-86581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MARKRKANNI EGESNMGSNW DEMVKEAAEV AALGGTRRAR KRFVGVRQRP SGRWVAEIKD  60
TIQKIRVWLG TFDTAEEAAR AYDEAACLLR GANTRTNFWP CASSSSPALP SKITNLLLQR  120
LKARNNPSPQ FDSASNSSPP INQNQLQQSP VHEELNHNHH HHFSETFTED FLDLPDDYVP  180
CNDDYISNTN SNLTPANSFD YNSASFESSL LTEKEPEVGS TQSDGLEIEE EEEEEEEEEE  240
EGIDFGFIDE IGSGCYSYSA FEIAEEIEKP GGNCLDAEAG LMQLRDEMER MNYERKFSAS  300
LYAFNGISEC LRLKLGAGNL NGRRRSEQLI TKLQNACNEK NKMEEEEKKL AKEDDEVKLE  360
KKITESSSMD THSSSSSSLN SDGELWGSLD LPPICFVN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_14.126
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021905341.10.0ethylene-responsive transcription factor CRF6-like
TrEMBLA0A061EEW91e-126A0A061EEW9_THECC; WIN1-like protein, putative
STRINGevm.model.supercontig_14.1260.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1827989
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-22related to AP2 11