PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.TU.contig_37010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family | NAC | ||||||||
Protein Properties | Length: 214aa MW: 24223.9 Da PI: 4.1707 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 30.2 | 1.3e-09 | 64 | 117 | 72 | 128 |
NAM 72 krknratksgyWkatgk.dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +r + +gyWk + +e++ ++ ++g k+ L+++ + +g++t+Wvm+eyr+ evm.TU.contig_37010.1 64 RRDDVVGGRGYWKPASEiAEEIVF-NDDKIGEKRELIYF---EADGSETQWVMDEYRM 117 333445679****66553788888.8999**********...677888********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 12.989 | 1 | 143 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.58E-18 | 19 | 143 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.9E-11 | 19 | 117 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MDFDPADLAK AMSLLSLGRF HPNDHQLILH FLTRKAMGLP LPQNRIYITA IDKWTNPQEL 60 TDDRRDDVVG GRGYWKPASE IAEEIVFNDD KIGEKRELIY FEADGSETQW VMDEYRMFLA 120 DEPPSSAKPD NVEEWLVYKL RNKKDVDVYD STDLDESDDV VSQIAREAAA AAALCILYEL 180 LDNEEEDAPP ASSTSTSEDL PDPKRRKGNT SGVI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | evm.TU.contig_37010.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021901179.1 | 1e-147 | NAC domain-containing protein 68-like | ||||
STRING | evm.TU.contig_37010.1 | 1e-156 | (Carica papaya) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 4e-10 | NAC domain containing protein 32 |
Link Out ? help Back to Top | |
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Phytozome | evm.TU.contig_37010.1 |