PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

estExt_fgenesh3_pg.C_50017

Common Name

CHLNCDRAFT_57178

Organism

Chlorella variabilis NC64A

Taxonomic ID

554065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella

Family

bZIP

Protein Properties

Length: 673aa MW: 72623 Da PI: 9.4511

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
estExt_fgenesh3_pg.C_50017	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.4	1.2e-06	618	650	2	34
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeek 34 +e+++ +r++ NRe+Arr R+++ + ++eL+ + estExt_fgenesh3_pg.C_50017 618 QERRKIKRRIANRESARRVRAKRAELMDELQAR 650 67899*************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF07819	3.1E-31	75	304	IPR012908	GPI inositol-deacylase PGAP1-like
SuperFamily	SSF53474	2.26E-13	76	274	IPR029058	Alpha/Beta hydrolase fold
Gene3D	G3DSA:3.40.50.1820	3.6E-13	77	223	IPR029058	Alpha/Beta hydrolase fold
Gene3D	G3DSA:1.20.5.170	1.7E-5	617	650	No hit	No description
SuperFamily	SSF57959	8.55E-5	621	653	No hit	No description
CDD	cd14702	7.57E-8	622	650	No hit	No description
PROSITE pattern	PS00036	0	624	639	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005783	Cellular Component	endoplasmic reticulum
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence Send to blast
MRHWLACAAF ALAALPLATL LRAYWLPRSC DTTYLWEGYE QVPLTQIHSR YRLIRFKDAD 60 PERREVYKKL QRLHVVPVLF VHGHLGTHQQ MRSAASETGR ELARRLTANA SWPLWLQWYS 120 TDFNAEASAL DAALLDKQAE FVVRCIQHLL RIHSSSNRHK PFRLVLVGYS MGGMVARDVV 180 RRLSAYAAEG FDPSYLVALV CLGSPHHFPA FVPRVLLSTV LKPAKAKEQA AASVIAAAAP 240 RVNIMAGAGD FSLPLTHPSA ATPLAPESGP QLSTLMRDMP GVWSTGSHKG IVSCNQLAGH 300 AAAVAVSLPR HVWPLSSGAC SSGKGVDFSC LAVLLLGTTP PWTLHIQPQQ CGSKVDSQDQ 360 ENILPAIVGV QAGAGAADSV RVAWSGTGSA SSGAVQLWDG VAPLGQLLLV SDPRCAYALR 420 LRWDLGGWLG LSLRHLLFVL PILCMALSQA RLSPMAGSTA RGLDFGLPLG MLPGIPETPN 480 MRLKQQAPQT ATEGHSSGHS GSGHLSPPDS PPQKTAVASG QGTCVGGKPA TRTYQLRTRS 540 SSLRAAWVEM EPEGKATGAA AEASTDSDGE AAQSGSDKED EEEQQQKQEE KEKAPSRKRV 600 GRPLAYNGNP DAPHLTDQER RKIKRRIANR ESARRVRAKR AELMDELQAR QPMLCCTGLD 660 KYASSQWASQ SV*

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence Send to blast

MRHWLACAAF ALAALPLATL LRAYWLPRSC DTTYLWEGYE QVPLTQIHSR YRLIRFKDAD  60
PERREVYKKL QRLHVVPVLF VHGHLGTHQQ MRSAASETGR ELARRLTANA SWPLWLQWYS  120
TDFNAEASAL DAALLDKQAE FVVRCIQHLL RIHSSSNRHK PFRLVLVGYS MGGMVARDVV  180
RRLSAYAAEG FDPSYLVALV CLGSPHHFPA FVPRVLLSTV LKPAKAKEQA AASVIAAAAP  240
RVNIMAGAGD FSLPLTHPSA ATPLAPESGP QLSTLMRDMP GVWSTGSHKG IVSCNQLAGH  300
AAAVAVSLPR HVWPLSSGAC SSGKGVDFSC LAVLLLGTTP PWTLHIQPQQ CGSKVDSQDQ  360
ENILPAIVGV QAGAGAADSV RVAWSGTGSA SSGAVQLWDG VAPLGQLLLV SDPRCAYALR  420
LRWDLGGWLG LSLRHLLFVL PILCMALSQA RLSPMAGSTA RGLDFGLPLG MLPGIPETPN  480
MRLKQQAPQT ATEGHSSGHS GSGHLSPPDS PPQKTAVASG QGTCVGGKPA TRTYQLRTRS  540
SSLRAAWVEM EPEGKATGAA AEASTDSDGE AAQSGSDKED EEEQQQKQEE KEKAPSRKRV  600
GRPLAYNGNP DAPHLTDQER RKIKRRIANR ESARRVRAKR AELMDELQAR QPMLCCTGLD  660
KYASSQWASQ SV*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_005849447.1	0.0	hypothetical protein CHLNCDRAFT_57178
TrEMBL	E1Z8J2	0.0	E1Z8J2_CHLVA; GPI inositol-deacylase
STRING	XP_005849447.1	0.0	(Chlorella variabilis)

Link Out ? help Back to Top
Entrez Gene	17356981

Publications ? help Back to Top
Blanc G, et al. The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Plant Cell, 2010. 22(9): p. 2943-55 [PMID:20852019]