PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | IGS.gm_1_00289 | ||||||||
Common Name | CHLNCDRAFT_133153 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 209aa MW: 22131.4 Da PI: 6.2826 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39 | 1.8e-12 | 94 | 142 | 3 | 51 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 + krerr++ NR Arr RqRK a ++eL+ v+ L+a N++L +l e IGS.gm_1_00289 94 SQKRERRRIANRDCARRIRQRKTALVAELTASVELLQADNSRLLGTLTE 142 67****************************************9877655 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-9 | 91 | 144 | No hit | No description |
SMART | SM00338 | 3.6E-8 | 92 | 156 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.3E-10 | 94 | 142 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.53 | 94 | 145 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.44E-9 | 96 | 146 | No hit | No description |
CDD | cd14702 | 2.33E-8 | 97 | 145 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042802 | Molecular Function | identical protein binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 209 aa Download sequence Send to blast |
MRSSREKLVV REASSSAYEG SEGDSPEARL EPQGWGGASQ TRGAWEHAWA ADRRASRDSE 60 PPAGGSCWGG SGGGSGALEE WEQEVELGMM SPESQKRERR RIANRDCARR IRQRKTALVA 120 ELTASVELLQ ADNSRLLGTL TEVTRCWRDT TIENCELRSQ IALLQAGGSA SGGSHSGGSG 180 GSGSLLASPT GDLGRHLLSP GWPSPMVL* |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00040 | PBM | Transfer from AT5G28770 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | - | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_005852098.1 | 1e-144 | hypothetical protein CHLNCDRAFT_133153 | ||||
TrEMBL | E1Z2H0 | 1e-142 | E1Z2H0_CHLVA; Uncharacterized protein | ||||
STRING | XP_005852098.1 | 1e-143 | (Chlorella variabilis) |
Link Out ? help Back to Top | |
---|---|
Entrez Gene | 17359010 |
Publications ? help Back to Top | |||
---|---|---|---|
|