PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | maker-scaffold20977-augustus-gene-0.2-mRNA-2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family | bZIP | ||||||||
Protein Properties | Length: 349aa MW: 38617.8 Da PI: 6.5618 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.1 | 1e-09 | 146 | 194 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l + maker-scaffold20977-augustus-gene-0.2-mRNA-2 146 KRAKRILANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLTLFQ 194 9****************************************99887655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.1E-16 | 142 | 206 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.542 | 144 | 207 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.4E-9 | 146 | 200 | No hit | No description |
Pfam | PF00170 | 1.7E-8 | 146 | 194 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.1E-10 | 146 | 197 | No hit | No description |
CDD | cd14703 | 9.36E-24 | 147 | 196 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MDHPTPKNPV SQTQQQQPQS DSDMGLSNPS RTGHHRRAHS EVHFRIPDDL DLGFDGGPSS 60 AAGFDEDDLF CTYMDIEKLG SRPDGHGSVA KPDNAGEEGE AEQSLRTRHR HSNSVDGGSL 120 NLMDSIEAKK AMAPAKLAEL WTVDPKRAKR ILANRQSAAR SKERKARYIL ELERKVQTLQ 180 TEATTLSAQL TLFQRDTTGL STENTELKLR LQAMEQQAQL RDALNEALKK EVERLKIATG 240 EIMTHNDTTY NLGMHHVSYP SSSFFSHQPQ PQPGDPQNIQ MPSPFHQFQS NTSTAHQPLL 300 AAAHSHAFTD MLQQDPLGRL QGLDISGRGS HMVKPEGTSI SVSESSNTF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00303 | DAP | Transfer from AT2G40620 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023907746.1 | 0.0 | transcription factor RF2b | ||||
Swissprot | O22873 | 1e-113 | BZP18_ARATH; bZIP transcription factor 18 | ||||
TrEMBL | A0A2I4ER27 | 1e-168 | A0A2I4ER27_JUGRE; transcription factor RF2b | ||||
STRING | VIT_13s0067g02900.t01 | 1e-161 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40620.1 | 1e-110 | bZIP family protein |
Publications ? help Back to Top | |||
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