PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID maker-scaffold04010-augustus-gene-0.13-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family bZIP
Protein Properties Length: 274aa    MW: 31144.3 Da    PI: 6.9534
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
maker-scaffold04010-augustus-gene-0.13-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.35.9e-12230271547
                                                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                                         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                                                    +r++r++kNRe+A rsR+RK+a++ eLe+ v +L   N+ L+k
  maker-scaffold04010-augustus-gene-0.13-mRNA-1 230 RRQKRMIKNRESAARSRARKQAYTNELETAVINLRDTNS-LIK 271
                                                    69************************************5.555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0047226273IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.611228274IPR004827Basic-leucine zipper domain
PfamPF001707.9E-10230272IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.2E-8230271No hitNo description
CDDcd147072.56E-17230272No hitNo description
Gene3DG3DSA:1.20.5.1706.5E-11230272No hitNo description
PROSITE patternPS000360233248IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MGDRTMVVSP NRGQGSLYNL TFDEVQSHLG NNICKPLNSM NLDELLRNVM SVEEGQLVQN  60
TSSSSPALLF LKNLNLNGTL RKKTVDELWK EIVHKQHVNE MEKEQSTLGE TTLEEFLVRA  120
GVISPQPIMA IDPMVMVSQQ ADWLQFQMAA VQQQNHQQQQ QQQQMTVLDS SFNVSESVYE  180
NPVVDVGYSE NQLDLSMPMP AISSASSDSQ VAAERKRRCS NEMMEKAIER RQKRMIKNRE  240
SAARSRARKQ AYTNELETAV INLRDTNSLI KKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023923934.11e-170ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBLA0A2N9FXK01e-148A0A2N9FXK0_FAGSY; Uncharacterized protein
STRINGGorai.010G045600.11e-107(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-38bZIP family protein