PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID maker-scaffold00256-augustus-gene-0.32-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family bZIP
Protein Properties Length: 361aa    MW: 39125.1 Da    PI: 6.7339
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
maker-scaffold00256-augustus-gene-0.32-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.81.8e-16161216358
                                                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                                         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                                                    + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L  eN++L k+l e++++++ 
  maker-scaffold00256-augustus-gene-0.32-mRNA-1 161 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTEINQKYSD 216
                                                    68************************************************999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-12158214No hitNo description
SMARTSM003389.6E-20159223IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.725161213IPR004827Basic-leucine zipper domain
PfamPF001703.8E-14162215IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.85E-12163214No hitNo description
PROSITE patternPS000360166181IPR004827Basic-leucine zipper domain
PfamPF124981.0E-47230356IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
TTASFNAGPP PNIPIDSEEY QAFLKSKLNL ACAAVALSRG SLVKPQDSGS LTDNGLQASN  60
TSQLGSQAPS KVWNTDVSLE ANSTVLEKVH VNSGVSGSGY DLSRSQDKDS NVSLGTHSLP  120
STQKRSGVPV RSTTSGSSRE QSDDEEVEGE NELTENMDPA DAKRVRRMLS NRESARRSRR  180
RKQAHLTELE TQVSQLRVEN SSLLKRLTEI NQKYSDAAVD NRVLKADVET LRAKVKMAEE  240
TVKRITGLNN TMFHGMSEMS SIEMPTFDGS PSDTSTDAAV PVQDNPNHHF YQPSTNNNMS  300
PHDLRVNNGL ADISPVENVQ QNPAAGAVSG NKMGRTASLQ RVASLEHLQK RIRGGVTNGE  360
Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175182RRSRRRKQ
2177182SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023874850.10.0light-inducible protein CPRF2-like isoform X1
SwissprotQ990901e-131CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2I4F5S31e-171A0A2I4F5S3_JUGRE; light-inducible protein CPRF2
STRINGXP_008218261.11e-154(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.27e-65bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]