PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID augustus_masked-scaffold04299-abinit-gene-0.4-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family VOZ
Protein Properties Length: 484aa    MW: 53772.2 Da    PI: 5.1539
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
augustus_masked-scaffold04299-abinit-gene-0.4-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ4441.8e-1362084241217
                                                   VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidl 57 
                                                           pppsaflgpkcalwdc+rpaqg+ew+qdycssfha+la neg+pg+ pvlrp+gi+l
  augustus_masked-scaffold04299-abinit-gene-0.4-mRNA-1 208 PPPSAFLGPKCALWDCPRPAQGMEWCQDYCSSFHAALAWNEGPPGMGPVLRPGGIGL 264
                                                           89******************************************************* PP

                                                   VOZ  58 kdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsllegetirewlffdk 114
                                                           kd+llf+alsak+qgk+vgipecegaatakspwna+elfdls+l+getirewlffdk
  augustus_masked-scaffold04299-abinit-gene-0.4-mRNA-1 265 KDALLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLDGETIREWLFFDK 321
                                                           ********************************************************* PP

                                                   VOZ 115 prrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlye 171
                                                           prrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlye
  augustus_masked-scaffold04299-abinit-gene-0.4-mRNA-1 322 PRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYE 378
                                                           ********************************************************* PP

                                                   VOZ 172 yeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                                                           yein++da+alyrlelklvd+kk++kgk+++ds+adlqk++grl+a
  augustus_masked-scaffold04299-abinit-gene-0.4-mRNA-1 379 YEINKCDACALYRLELKLVDGKKNSKGKITNDSVADLQKQMGRLSA 424
                                                           ********************************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MGKGSKSNCR STSHKLFKDK AKNRVDDLQG MFMDLQFARK ESRTVDVAVL EEQVHQMLRE  60
WKSELNEPSP ASSLQQGGSL GSFSSDICRL LQLCEEEDDA TSPLAAPKPE PNDQSVQVGG  120
DVVFQEGFNV NQGQQDHSFP LIGECKNPSS EVRDMAVNSL EGATQVDYNQ FDLQPDFEHN  180
FYSGINGTGL TAEDAVPHTS SYLPSICPPP SAFLGPKCAL WDCPRPAQGM EWCQDYCSSF  240
HAALAWNEGP PGMGPVLRPG GIGLKDALLF SALSAKAQGK DVGIPECEGA ATAKSPWNAP  300
ELFDLSVLDG ETIREWLFFD KPRRAFESGN RKQRSLPDYS GRGWHESRKQ VMNEFGGLKR  360
SYYMDPQPLN HFEWHLYEYE INKCDACALY RLELKLVDGK KNSKGKITND SVADLQKQMG  420
RLSAEFPSDN KRSVKGRAKV NAKVGVGSVY PVPNRMAPTN GTYEYGVNTP YDYLVDNINE  480
YYLT
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023908455.10.0transcription factor VOZ1
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A2N9ELG30.0A0A2N9ELG3_FAGSY; Uncharacterized protein
STRINGXP_008245366.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14983494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]