PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MELO3C020437P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family | bHLH | ||||||||
Protein Properties | Length: 107aa MW: 12532.8 Da PI: 10.8785 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.7 | 1.3e-05 | 11 | 54 | 7 | 37 |
HHHHHHHHHHHHHHHHHHCTSCCC................TTS- CS HLH 7 erErrRRdriNsafeeLrellPkas.............kapskK 37 erEr+RR++i + Lr llP + k++ kK MELO3C020437P1 11 ERERQRRQEISALYMPLRILLPLEFikvicgtvhrgrdKQREKK 54 8*********************9888888888887776444443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence Send to blast |
MDKDVVELGR ERERQRRQEI SALYMPLRIL LPLEFIKVIC GTVHRGRDKQ REKKRKKKDQ 60 ELTGDDIGLF VVGLHRYGSP LSRRKDIEMR RIGLRLGFSL CVICRL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 44 | 56 | RGRDKQREKKRKK |
2 | 52 | 56 | KKRKK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681845 | 1e-180 | LN681845.1 Cucumis melo genomic scaffold, anchoredscaffold00043. | |||
GenBank | LN713259 | 1e-180 | LN713259.1 Cucumis melo genomic chromosome, chr_5. |