PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C019429P2
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 377aa    MW: 42334.7 Da    PI: 8.7309
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C019429P2genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.92.2e-082422881763
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     A+rsR RK+++i+eLe+kv++L+ae ++   ele l+++   l +e+
  MELO3C019429P2 242 AQRSRVRKLQYIAELERKVQALQAEGSEVSAELEFLNQQNLILSMEN 288
                     89***********************************9998887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0011231290IPR004827Basic-leucine zipper domain
CDDcd147031.12E-15235281No hitNo description
SuperFamilySSF579591.94E-6242284No hitNo description
Gene3DG3DSA:1.20.5.1704.1E-6242284No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MANSKGSSNV RSFMSSGKHA LLPPKSPFPS VSPSYTEYVP NTVIGAKAVQ RPRDGNSYHQ  60
RTSSESILIE EQPSWLDDLL NEPETPVRRV GHRRSSSDSF AYTDAANVNF DSMQEEFRYA  120
NAIPGHSWLS QEFDHQRDAR HASFYTEPNV TKQKNRVWES SLSTMNNPIG LHSPRETIGI  180
HTSGPLSTPQ EADGLPSTAS EKQDPVESGS HDPKVASDRK DTSHGKSAVS DTENKRAKQQ  240
FAQRSRVRKL QYIAELERKV QALQAEGSEV SAELEFLNQQ NLILSMENKA LKQRLENLAQ  300
EQLIKYLEQE VLEREIGRLR TVHQQHQQQQ QPQQLRPSSS HRRTSSKDLD NQFANLSLKQ  360
KDSGSSRDPV TGPVRS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818510.0LN681851.1 Cucumis melo genomic scaffold, anchoredscaffold00038.
GenBankLN7132600.0LN713260.1 Cucumis melo genomic chromosome, chr_6.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008456043.10.0PREDICTED: uncharacterized protein At4g06598
TrEMBLA0A1S3C2E70.0A0A1S3C2E7_CUCME; uncharacterized protein At4g06598
STRINGXP_008456043.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-110bZIP family protein