PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C017592P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family EIL
Protein Properties Length: 419aa    MW: 48248 Da    PI: 4.5785
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C017592P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3233.51.3e-71291941180
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     ++lkkrmw+d+++lk++ker+ +    +e+     +s  ++e++rrkkm+raQD+iLk M k+me+c+aqGfvYgi+pekgkpv+g+s+sLr+WW
  MELO3C017592P1  29 DDLKKRMWRDRQRLKKMKERHDE----EEP-----ESAAREEASRRKKMARAQDSILKCMDKIMEACKAQGFVYGIVPEKGKPVTGSSESLREWW 114
                     79*************88888776....455.....556789****************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180
                     k++v+f++++p+ai+k  + ++i    +++ ++++s  h l +lqDTtlgS+Lsalmqhc ppqr+fplekg++pPWWPtG+el 
  MELO3C017592P1 115 KDDVRFEQDAPMAIAKFLP-KVI----EESGIDPNSFLHLLTDLQDTTLGSILSALMQHCIPPQRKFPLEKGLAPPWWPTGNELC 194
                     ****************944.444....2344589*************************************************85 PP
2EIN372.89.2e-23194319208353
                     HHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX CS
            EIN3 208 svLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavktta 302
                      vL+avikhm p+++++r+l rqsk lq km+ake+ ++++v+nqee++++        l   ++++ + +e++e+ e +k++     q+     
  MELO3C017592P1 194 CVLAAVIKHMLPDLDNMRKLIRQSKNLQAKMTAKETLTWAKVVNQEEALLK--------L--TKKSLRITDEEEEEEEHNKNRD---KQCS---- 271
                     69*********************************************9772........3..5566777777666555444433...2333.... PP

                     XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
            EIN3 303 gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                       ++  krk   se++ +s++ + + cq++ +++se+ ++f dk +++++e
  MELO3C017592P1 272 -DEIMTKRK-CVSEQEPISDS-MLYPCQNQWCPQSEVLMGFIDKRARTEHE 319
                     .35677777.79999999988.68************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.2E-7529193No hitNo description
Gene3DG3DSA:1.10.3180.103.0E-23145192IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.71E-39147243IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048731.4E-12193240No hitNo description
Gene3DG3DSA:1.10.3180.105.3E-17194246IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MVEFHGEIRS HNNDEDDRDQ EPEEEISYDD LKKRMWRDRQ RLKKMKERHD EEEPESAARE  60
EASRRKKMAR AQDSILKCMD KIMEACKAQG FVYGIVPEKG KPVTGSSESL REWWKDDVRF  120
EQDAPMAIAK FLPKVIEESG IDPNSFLHLL TDLQDTTLGS ILSALMQHCI PPQRKFPLEK  180
GLAPPWWPTG NELCVLAAVI KHMLPDLDNM RKLIRQSKNL QAKMTAKETL TWAKVVNQEE  240
ALLKLTKKSL RITDEEEEEE EHNKNRDKQC SDEIMTKRKC VSEQEPISDS MLYPCQNQWC  300
PQSEVLMGFI DKRARTEHET QCICRGERSE EFSDEQSIDT HLKSVVEWMN WELGRAEAGS  360
EEARIEDAGD GSGSSTVEDY GSGYWNMDLN ASPGEDLSGQ QQDATSIWDL RYEWGAEE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A3e-361482424126Protein ETHYLENE INSENSITIVE 3
4zds_B3e-361482424126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818740.0LN681874.1 Cucumis melo genomic scaffold, anchoredscaffold00031.
GenBankLN7132610.0LN713261.1 Cucumis melo genomic chromosome, chr_7.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004146925.20.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-105EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A1S4DZT81e-155A0A1S4DZT8_CUCME; putative ETHYLENE INSENSITIVE 3-like 4 protein
STRINGXP_008453800.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.17e-85EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]