PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MELO3C015611P2

Common Name

LOC103492454

Organism

Cucumis melo

Taxonomic ID

3656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis

Family

bZIP

Protein Properties

Length: 271aa MW: 30371.3 Da PI: 9.915

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MELO3C015611P2	genome	MELONOMICS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41	4.2e-13	200	244	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r +rk+kNRe+A rsR+RK+a++ eL +kv Le+eN +Lk e + MELO3C015611P2 200 RRLKRKIKNRESAARSRARKQAYQNELVNKVSRLEEENLKLKRE-K 244 689***********************************999955.4 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.1E-11	190	243	No hit	No description
SMART	SM00338	2.0E-8	196	264	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.841	198	243	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.6E-11	200	244	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.88E-9	200	245	No hit	No description
CDD	cd14707	2.33E-16	200	254	No hit	No description
PROSITE pattern	PS00036	0	203	218	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence Send to blast
MGIQTMGSQL NGQQSHLHPA SLPRQNSWYG LTLDEVKNQL GGMGKPLGSM NLDELLHNIW 60 TAEANQSMGM ESESSSSIHS LQRQASFSLA RALSGKTVDH VWKEIQEGQK KKNRADLKSQ 120 NSETTLGAVT LEDFLIQAGI YAEASPSPLD AIDTMTLEEK NFSLEMGLLS SSLSLGTLSD 180 TTIPKRRRDP SDTLEKTMER RLKRKIKNRE SAARSRARKQ AYQNELVNKV SRLEEENLKL 240 KREKEFDNMM QSKPISEPKY QLRRTSSASF *

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ876930	0.0	HQ876930.1 Cucumis melo bZIP1 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001284432.1	0.0	uncharacterized protein LOC103492454
Refseq	XP_008451062.1	0.0	PREDICTED: uncharacterized protein LOC103492454 isoform X2
Swissprot	Q9LES3	9e-63	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	F1DQG0	0.0	F1DQG0_CUCME; BZIP1
STRING	XP_008451051.1	1e-172	(Cucumis melo)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF12464	25	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41070.3	1e-46	bZIP family protein

Link Out ? help Back to Top
Entrez Gene	103492454

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]