PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MELO3C015611P1

Common Name

LOC103492454

Organism

Cucumis melo

Taxonomic ID

3656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis

Family

bZIP

Protein Properties

Length: 204aa MW: 23044.1 Da PI: 10.2492

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MELO3C015611P1	genome	MELONOMICS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.5	3e-13	133	177	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r +rk+kNRe+A rsR+RK+a++ eL +kv Le+eN +Lk e + MELO3C015611P1 133 RRLKRKIKNRESAARSRARKQAYQNELVNKVSRLEEENLKLKRE-K 177 689***********************************999955.4 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.2E-11	123	176	No hit	No description
SMART	SM00338	2.0E-8	129	197	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.841	131	176	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.8E-11	133	177	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.13E-9	133	178	No hit	No description
CDD	cd14707	5.83E-15	133	187	No hit	No description
PROSITE pattern	PS00036	0	136	151	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence Send to blast
MGMESESSSS IHSLQRQASF SLARALSGKT VDHVWKEIQE GQKKKNRADL KSQNSETTLG 60 AVTLEDFLIQ AGIYAEASPS PLDAIDTMTL EEKNFSLEMG LLSSSLSLGT LSDTTIPKRR 120 RDPSDTLEKT MERRLKRKIK NRESAARSRA RKQAYQNELV NKVSRLEEEN LKLKREKEFD 180 NMMQSKPISE PKYQLRRTSS ASF*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ876930	0.0	HQ876930.1 Cucumis melo bZIP1 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001284432.1	1e-144	uncharacterized protein LOC103492454
Refseq	XP_008451062.1	1e-144	PREDICTED: uncharacterized protein LOC103492454 isoform X2
TrEMBL	F1DQG0	1e-143	F1DQG0_CUCME; BZIP1
STRING	XP_008451051.1	1e-118	(Cucumis melo)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41070.3	4e-33	bZIP family protein

Link Out ? help Back to Top
Entrez Gene	103492454