PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C015377P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 384aa    MW: 42399.1 Da    PI: 8.378
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C015377P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.61e-16204259358
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                     + kr rr+ +NRe+ArrsR+RK+a + eLe+kv+eL  eN++L k+ + +++++ +
  MELO3C015377P1 204 SAKRIRRMLSNRESARRSRKRKQAHLTELETKVAELRLENSTLLKRFSDISQKYNE 259
                     78********************************************9999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.4E-12200258No hitNo description
SMARTSM003382.1E-17202266IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.427204259IPR004827Basic-leucine zipper domain
PfamPF001705.5E-14204258IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-11206256No hitNo description
CDDcd147028.20E-17207258No hitNo description
PROSITE patternPS000360209224IPR004827Basic-leucine zipper domain
PfamPF124982.2E-16273320IPR020983Basic leucine-zipper, C-terminal
PfamPF124982.7E-10320370IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MMDRVLFSVD GISDQFWPSP DPPEESSKLN RSASEWSFRR FLQEAASVSD SSISPPPASP  60
SNAVEVKESG EKLKRNWEKQ SIRNNGEIEE ERMKSSGGDS EEYRAFLKSK LNLACAAVAL  120
CRGSFRKNQD SCASSTLAQN ESQASASHLP SQSPSKGISC SPCVQKKDGI QVSSANISSS  180
REQTDEEDDV EGENDMNEQM DPASAKRIRR MLSNRESARR SRKRKQAHLT ELETKVAELR  240
LENSTLLKRF SDISQKYNEA AVNNRVLKAD LETLRAKVQM AEETVKRITG TKSMFHAMSE  300
VSSISIQSFE GSPSEISTDA HNSHIADISS ANIQKNSPEM ATVPRNKMAR TASLRRVASL  360
EHLQKRIRGN SSTCHPSGKG DQQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218224RRSRKRK
2218225RRSRKRKQ
3220225SRKRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818060.0LN681806.1 Cucumis melo genomic scaffold, anchoredscaffold00025.
GenBankLN7132560.0LN713256.1 Cucumis melo genomic chromosome, chr_2.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008450742.10.0PREDICTED: light-inducible protein CPRF2-like
RefseqXP_008450743.10.0PREDICTED: light-inducible protein CPRF2-like
SwissprotQ990902e-97CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A1S3BPV60.0A0A1S3BPV6_CUCME; light-inducible protein CPRF2-like
STRINGXP_008450742.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.21e-69bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]