PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C014408P3
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bHLH
Protein Properties Length: 273aa    MW: 30295.2 Da    PI: 6.9633
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C014408P3genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.88.2e-08154195855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++r+R  ri +++e L ellP++      K + a+ L  A+++Ik+Lq
  MELO3C014408P3 154 ADRQRKMRIAERLEALLELLPPS------KENQASALDDAIDHIKYLQ 195
                     68*********************......9*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-8153205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-7154205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.6E-5154195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MKLDSNVVKM EGQNGCNNSV RMLSLNFGAN VNIVSQARRD FTNHHHVLPA DRNVNQTNIP  60
HLTEWTQAAK TSPAFVEFIA DTSNFSRETS TKDVIAVVPS TVQTINGVSE LRSKISYNHL  120
AGSYNSKPTD SRNNARGTLS KSRPSSSSKR GYSADRQRKM RIAERLEALL ELLPPSKENQ  180
ASALDDAIDH IKYLQLRIKD LSQSKLGGEL SSEPFIFVEG YGHYMNHQEM QISEPLEEMV  240
GKLMEVDPLA AAQLLENKGL FVMPMDFVEG LC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818420.0LN681842.1 Cucumis melo genomic scaffold, anchoredscaffold00022.
GenBankLN7132590.0LN713259.1 Cucumis melo genomic chromosome, chr_5.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008449452.10.0PREDICTED: transcription factor bHLH69-like isoform X1
TrEMBLA0A1S3BMP90.0A0A1S3BMP9_CUCME; transcription factor bHLH69-like isoform X1
STRINGXP_008449451.10.0(Cucumis melo)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.15e-15LJRHL1-like 2