PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C014384P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 268aa    MW: 29784.6 Da    PI: 9.9996
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C014384P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.93e-15188248463
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka.Lkkeleelkkevaklksev 63 
                      +++rr++kNRe+A rsR+RK+a++ eLe  v +Le+e+ + L++e+e++k+ +++lk+++
  MELO3C014384P1 188 QQKQRRMIKNRESAARSRERKQAYTLELESLVTQLEQERARlLREEVEHIKERSKQLKKKL 248
                     689************************************984599*************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.4E-10185250IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.392187232IPR004827Basic-leucine zipper domain
PfamPF001705.3E-13187248IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-9189244No hitNo description
CDDcd147077.31E-17189236No hitNo description
Gene3DG3DSA:1.20.5.1702.5E-13190248No hitNo description
PROSITE patternPS000360192207IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MASSNVEIAS TSKTNPDLPP QSSLSSISSV IADPSRNLVS ITMDDLLKNM YSDAQTHTQN  60
PIIASSSSSS IPSHELSSRT VDEVWKEIVS GGDQRRDPAM DREITLEDFL SKSGAVRDED  120
LRVPVVSEPV GGYAVDSTLN NNQLQIPSQQ LEGPMVGGYA SGIDGRIVGV GRGKRRAVVE  180
EPVDKATQQK QRRMIKNRES AARSRERKQA YTLELESLVT QLEQERARLL REEVEHIKER  240
SKQLKKKLIP ISEKRRPKRM LRRVNSL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818420.0LN681842.1 Cucumis melo genomic scaffold, anchoredscaffold00022.
GenBankLN7132590.0LN713259.1 Cucumis melo genomic chromosome, chr_5.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008449422.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X1
TrEMBLA0A1S3BLD60.0A0A1S3BLD6_CUCME; ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X1
STRINGXP_008449422.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.17e-31bZIP family protein