PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C014141P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family NAC
Protein Properties Length: 467aa    MW: 54632.3 Da    PI: 6.3081
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C014141P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM120.12e-37121351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp GfrF+Pt+eel+++yL++k+ g++  + + i+++d+++++PwdL+k   +++++ ew+fF +  +      +++r+t+sg W++tg dk+++
  MELO3C014141P1  12 LPIGFRFRPTEEELITHYLRNKILGRQSLV-QYIPQIDLFNYDPWDLRKfsLLESDNYEWFFFRSLTS------KTKRTTSSGCWRSTGDDKRIM 99 
                     699************************777.88**************84334555556*****98866......5789***************** PP

             NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++ +++++ ++k+Lvfy+gr +++ekt+Wv+hey l
  MELO3C014141P1 100 ARgTNNVIATRKILVFYRGRGKDAEKTKWVIHEYYL 135
                     *9667789**************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-4210155IPR003441NAC domain
PROSITE profilePS5100544.35312157IPR003441NAC domain
PfamPF023653.4E-2213134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MESFTIPPND LLPIGFRFRP TEEELITHYL RNKILGRQSL VQYIPQIDLF NYDPWDLRKF  60
SLLESDNYEW FFFRSLTSKT KRTTSSGCWR STGDDKRIMA RGTNNVIATR KILVFYRGRG  120
KDAEKTKWVI HEYYLQQDTN GISSSQLPFV VCRLKENEEE FRSDDQRKKR KKRQIRWNVD  180
NDQPASEDFP NTHQPTQPPN YFENEGSLIE FVNSMFDPDK CLDDASSKMC KTTPLCSESE  240
PREQGSMNII QHCSDSNSEV NNQLLQPESS MASELNSYKL NLLLNEMLDN DETFDEVTAN  300
NRTDNYSKEE LESMVHELFQ AGDTTFSISD FGEGPRTIIQ KSRRKPLMAK HSQYKEEKDE  360
LQDNSCGQTL KVQRQPKSDN IVSHRDEPKR DQLRREIRCK IMQQHKAEED EKHISGTYSN  420
ESPRNCFWYI LTTKRIHHKS SDQPIDYVAK VLLGFIMLIM LVQTSF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-261216015173Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166172RKKRKKR
2167171KKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818600.0LN681860.1 Cucumis melo genomic scaffold, anchoredscaffold00021.
GenBankLN7132600.0LN713260.1 Cucumis melo genomic chromosome, chr_6.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008449087.10.0PREDICTED: NAC domain-containing protein 91-like
TrEMBLA0A1S3BM550.0A0A1S3BM55_CUCME; NAC domain-containing protein 91-like
STRINGXP_008449087.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2483433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.32e-38NAC transcription factor-like 9