PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MELO3C013748P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family | bZIP | ||||||||
Protein Properties | Length: 212aa MW: 23399.1 Da PI: 10.4648 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.7 | 1.7e-15 | 141 | 190 | 4 | 53 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 ++r++r++kNRe+A rsR+RK+a+ eLe +v +L++eN +L+ + eel+ MELO3C013748P1 141 DRRQKRMIKNRESAARSRARKQAYANELELEVSNLKEENAKLRRQQEELQ 190 79*****************************************9988885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.5E-11 | 138 | 202 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.576 | 140 | 190 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.1E-15 | 142 | 191 | No hit | No description |
SuperFamily | SSF57959 | 5.38E-12 | 142 | 192 | No hit | No description |
CDD | cd14707 | 3.30E-25 | 142 | 196 | No hit | No description |
Pfam | PF00170 | 1.9E-13 | 142 | 190 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 145 | 160 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
MEEVWKDITL SSLHSRSDHD FSSAAPTPIS LHLHHHHSAA NLRHIILQDF LSSSTSKLDS 60 SSSSSSAAAA AVPSLPPPPP TVLSLNSTRE LHFLDNPIAA AHFRHQDPSS VSAAFHSPFD 120 QVLGPPPFGK KRVTDSDNSG DRRQKRMIKN RESAARSRAR KQAYANELEL EVSNLKEENA 180 KLRRQQEELQ AVAMAQVPRK HRLQRTSTAP F* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681860 | 0.0 | LN681860.1 Cucumis melo genomic scaffold, anchoredscaffold00021. | |||
GenBank | LN713260 | 0.0 | LN713260.1 Cucumis melo genomic chromosome, chr_6. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008448521.1 | 1e-150 | PREDICTED: protein FD | ||||
Swissprot | Q84JK2 | 1e-47 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A1S3BJW5 | 1e-149 | A0A1S3BJW5_CUCME; protein FD | ||||
STRING | XP_008448521.1 | 1e-150 | (Cucumis melo) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 7e-35 | bZIP family protein |