PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MELO3C012485P2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family | bZIP | ||||||||
Protein Properties | Length: 70aa MW: 7952.8 Da PI: 10.8688 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.6 | 6.5e-09 | 44 | 68 | 3 | 27 |
XXCHHHCHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkae 27 + k rr+++NReAAr+sR+RKka+ MELO3C012485P2 44 DQKTLRRLAQNREAARKSRLRKKAS 68 5678899****************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-5 | 35 | 67 | No hit | No description |
Pfam | PF07716 | 1.6E-5 | 42 | 67 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 49 | 64 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 70 aa Download sequence Send to blast |
MTDVSPRTDI STDVDTDDKH QRLDMLQRNA VASDSSDRTK DKSDQKTLRR LAQNREAARK 60 SRLRKKASH* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681896 | 5e-32 | LN681896.1 Cucumis melo genomic scaffold, anchoredscaffold00016. | |||
GenBank | LN713264 | 5e-32 | LN713264.1 Cucumis melo genomic chromosome, chr_10. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004142384.1 | 9e-38 | PREDICTED: transcription factor TGA2-like isoform X1 | ||||
Refseq | XP_008446973.1 | 1e-37 | PREDICTED: transcription factor TGA2-like | ||||
Refseq | XP_008446976.1 | 1e-37 | PREDICTED: transcription factor TGA2-like | ||||
Refseq | XP_011655926.1 | 9e-38 | PREDICTED: transcription factor TGA2-like isoform X1 | ||||
Refseq | XP_011655927.1 | 9e-38 | PREDICTED: transcription factor TGA2-like isoform X1 | ||||
Swissprot | Q39140 | 4e-20 | TGA6_ARATH; Transcription factor TGA6 | ||||
TrEMBL | A0A0A0KV59 | 2e-36 | A0A0A0KV59_CUCSA; Uncharacterized protein | ||||
TrEMBL | A0A1S3BGZ3 | 2e-36 | A0A1S3BGZ3_CUCME; transcription factor TGA2-like | ||||
STRING | XP_008446973.1 | 4e-37 | (Cucumis melo) | ||||
STRING | XP_004142384.1 | 3e-37 | (Cucumis sativus) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06960.2 | 2e-13 | OCS-element binding factor 5 |