PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C011839P2
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 385aa    MW: 43344.3 Da    PI: 9.2325
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C011839P2genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.26.5e-072553011763
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     A+rsR RK+++i+eLe+ v++L+a  ++   ele l+ +   l +e+
  MELO3C011839P2 255 AQRSRVRKLQYIAELERNVQALQANGSEVSAELEFLSRQNLILGMEN 301
                     89****************************99999998887777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0042244303IPR004827Basic-leucine zipper domain
CDDcd147031.78E-13248294No hitNo description
SuperFamilySSF579595.13E-5255297No hitNo description
Gene3DG3DSA:1.20.5.1705.6E-5255295No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MQCRRRNSSV ETCEVNAMEN SKVLSNMRNM ISSGKHALLP PKSPVPSGSS TYSEYLPNPI  60
VGSRAVQNPR VGNVNHHRTS SESLLMEEQP SWLDDLLNEP ETPVQRGGHR RSSSDSFAYL  120
DAGNVSNENY TQDDSQCKNM YLPSWASQDF DSHQASLYMK PSWNKQKNRT RELPPTTLTT  180
NPGGRPSAKN SILLESLRTL STAQEANEFS STTTEKLDSA ETALPDRKLS ERMDSSHVKP  240
GPTDTDNKRA KQQFAQRSRV RKLQYIAELE RNVQALQANG SEVSAELEFL SRQNLILGME  300
NKALKQRLES LSQEQLIKYL EHEVLEKEIG RLRMLYQQQQ QPQPPPSNLK RTKSRDLETQ  360
FSKLSLRQKD SRSGSESVAG PVQI*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818960.0LN681896.1 Cucumis melo genomic scaffold, anchoredscaffold00016.
GenBankLN7132640.0LN713264.1 Cucumis melo genomic chromosome, chr_10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008445999.10.0PREDICTED: uncharacterized protein At4g06598 isoform X1
TrEMBLA0A1S3BEP80.0A0A1S3BEP8_CUCME; uncharacterized protein At4g06598 isoform X1
STRINGXP_008445999.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.23e-97bZIP family protein