PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MELO3C011839P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family | bZIP | ||||||||
Protein Properties | Length: 368aa MW: 41379.1 Da PI: 9.3804 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.1 | 7e-07 | 238 | 284 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+a ++ ele l+ + l +e+ MELO3C011839P1 238 AQRSRVRKLQYIAELERNVQALQANGSEVSAELEFLSRQNLILGMEN 284 89****************************99999998887777766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0042 | 227 | 286 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.07E-13 | 231 | 277 | No hit | No description |
SuperFamily | SSF57959 | 5.84E-5 | 238 | 280 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.2E-5 | 238 | 278 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence Send to blast |
MENSKVLSNM RNMISSGKHA LLPPKSPVPS GSSTYSEYLP NPIVGSRAVQ NPRVGNVNHH 60 RTSSESLLME EQPSWLDDLL NEPETPVQRG GHRRSSSDSF AYLDAGNVSN ENYTQDDSQC 120 KNMYLPSWAS QDFDSHQASL YMKPSWNKQK NRTRELPPTT LTTNPGGRPS AKNSILLESL 180 RTLSTAQEAN EFSSTTTEKL DSAETALPDR KLSERMDSSH VKPGPTDTDN KRAKQQFAQR 240 SRVRKLQYIA ELERNVQALQ ANGSEVSAEL EFLSRQNLIL GMENKALKQR LESLSQEQLI 300 KYLEHEVLEK EIGRLRMLYQ QQQQPQPPPS NLKRTKSRDL ETQFSKLSLR QKDSRSGSES 360 VAGPVQI* |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681896 | 0.0 | LN681896.1 Cucumis melo genomic scaffold, anchoredscaffold00016. | |||
GenBank | LN713264 | 0.0 | LN713264.1 Cucumis melo genomic chromosome, chr_10. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008445999.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598 isoform X1 | ||||
TrEMBL | A0A1S3BEP8 | 0.0 | A0A1S3BEP8_CUCME; uncharacterized protein At4g06598 isoform X1 | ||||
STRING | XP_008445999.1 | 0.0 | (Cucumis melo) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 2e-97 | bZIP family protein |