PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C011388P2
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 302aa    MW: 33804.3 Da    PI: 10.0205
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C011388P2genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.1e-101556445
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                     k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  MELO3C011388P2 15 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 56
                    6889*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.3E-8659No hitNo description
SMARTSM003381.1E-81275IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4151458IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.81E-71659No hitNo description
PfamPF001704.3E-71656IPR004827Basic-leucine zipper domain
PROSITE patternPS0003601934IPR004827Basic-leucine zipper domain
PfamPF141443.7E-3298173IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MASDSSDRSK DKTDQKTLRR LAQNREAARK SRLRKKAYVQ QLESSRLKLT QLEQELQRAR  60
QQGIFISSSG DQTHSMSGNG AMAFDVEYAR WLEDHNRQLN ELRSAVNSHA SDPELRIVVD  120
GILVHYDELF RLKGNAAKAD VFHLLSGMWK TPAERCFLWL GGFRSSELLK LLVNQLEPLT  180
EQQLVGITNL QQSSQQAEDA LSQGMEALQQ SLAETLSSGA LGSSGSSGNV ANYMGQMAMA  240
MGKLGTLEGF IRQADNLRQQ TLQQMHRILT TRQSARALLA IHDYFSRLRA LSSLWLARPR  300
E*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818231e-150LN681823.1 Cucumis melo genomic scaffold, anchoredscaffold00014.
GenBankLN7132571e-150LN713257.1 Cucumis melo genomic chromosome, chr_3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008445387.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_008445388.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_008445389.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_008445390.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_008445393.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_008445395.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_008445396.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_008445397.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_016900012.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_016900013.10.0PREDICTED: transcription factor TGA2-like
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A1S3BCK90.0A0A1S3BCK9_CUCME; transcription factor TGA2-like
STRINGXP_008445387.10.0(Cucumis melo)
STRINGXP_004165289.10.0(Cucumis sativus)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-147bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]