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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
MELO3C010996P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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| Family |
BBR-BPC |
| Protein Properties |
Length: 339aa MW: 37767.8 Da PI: 10.023 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C010996P1 | genome | MELONOMICS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 391.8 | 9.7e-120 | 1 | 338 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88
mdd+g+re r+k+ +y++a + + +++ +q+m+++aerda+i+ernlalsekkaa+aerdma+lqrd+a+aern+al+erdn++++l+++e
MELO3C010996P1 1 MDDSGHREngRHKPdQYKSAqgQWMMQHQpsMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAYLQRDAAIAERNNALLERDNAIATLQYRE 95
9*****999*********6656445545422469************************************************************* PP
GAGA_bind 89 nsla..salpvgvqvlsgtksidslqq.lse..pqledsavelreeekleal....pieeaaeeakekkkkkkrqrakkpkekkakkkkkkseks 174
ns++ ++p+g+q+ +g+k+i++ qq +++ p+++++ ++ r++ ++ + p+ ++ ++a+++k++k++++ ++p +k +k ++k
MELO3C010996P1 96 NSINnnLSCPPGCQIARGVKHIHHPQQqHTHhvPHMNENNYNSRDMLASNDPcptsPVASESTKARRNKRTKEGKTVTTPNKKVSKGPRK----- 185
*9987789****************9994334799*******9887765443211114444444444455555555555555554443333..... PP
GAGA_bind 175 kkkvkkesader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiS 240
vk+e +d + sk+++k +dl+ln+v++Dest+P+P+CsCtG+ rqCYkWGnGGWqSaCCttt+S
MELO3C010996P1 186 ---VKREAEDLNkimlgksqewkdgigimsggddlnkqlvvSKSDWKGQDLGLNQVAFDESTMPAPICSCTGVIRQCYKWGNGGWQSACCTTTLS 277
...333332211233344456889*********************************************************************** PP
GAGA_bind 241 vyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
+yPLP+++++r+aR++grKmS++af+klL++LaaeG+dls pvDLk+hWAkHGtn+++ti+
MELO3C010996P1 278 MYPLPAVPNKRHARLGGRKMSGSAFNKLLSRLAAEGHDLSSPVDLKNHWAKHGTNRYITIK 338
************************************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0005730 | Cellular Component | nucleolus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MDDSGHRENG RHKPDQYKSA QGQWMMQHQP SMKQIMAIMA ERDAAIQERN LALSEKKAAL 60
AERDMAYLQR DAAIAERNNA LLERDNAIAT LQYRENSINN NLSCPPGCQI ARGVKHIHHP 120
QQQHTHHVPH MNENNYNSRD MLASNDPCPT SPVASESTKA RRNKRTKEGK TVTTPNKKVS 180
KGPRKVKREA EDLNKIMLGK SQEWKDGIGI MSGGDDLNKQ LVVSKSDWKG QDLGLNQVAF 240
DESTMPAPIC SCTGVIRQCY KWGNGGWQSA CCTTTLSMYP LPAVPNKRHA RLGGRKMSGS 300
AFNKLLSRLA AEGHDLSSPV DLKNHWAKHG TNRYITIK*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269|PubMed:14731261}. |
