PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MELO3C010435P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family | bZIP | ||||||||
Protein Properties | Length: 203aa MW: 22643.4 Da PI: 9.877 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.5 | 1.6e-14 | 122 | 171 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r+rr++kNRe+A rsR+RK+a++ +Le +v L++ N+ L+k+ + +k MELO3C010435P1 122 RRQRRMIKNRESAARSRARKQAYTNQLEHEVSCLKKTNSWLRKQEARSRK 171 69****************************************98666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.1E-12 | 118 | 182 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.174 | 120 | 165 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.13E-11 | 122 | 172 | No hit | No description |
CDD | cd14707 | 4.63E-20 | 122 | 165 | No hit | No description |
Pfam | PF00170 | 6.3E-13 | 122 | 171 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.7E-14 | 122 | 170 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 125 | 140 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MSVEEAEIVH NPSSSSSSSP AAATVSLFLG KRNKDIKPQP DPMAEVSASA DGMDWIHYQQ 60 ALLIDSKSPV SQGVYNHGGI GVYNMEAMSM TTSASSNSDF QEGNCERKRR QVDDMKEKTI 120 ERRQRRMIKN RESAARSRAR KQAYTNQLEH EVSCLKKTNS WLRKQEARSR KTTFFKSNPS 180 AEIPTAAHQL GLLLDSDLHK QT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 105 | 110 | ERKRRQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681867 | 0.0 | LN681867.1 Cucumis melo genomic scaffold, anchoredscaffold00013. | |||
GenBank | LN713261 | 0.0 | LN713261.1 Cucumis melo genomic chromosome, chr_7. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008444114.1 | 1e-111 | PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like | ||||
TrEMBL | A0A1S3BAD3 | 1e-110 | A0A1S3BAD3_CUCME; protein ABSCISIC ACID-INSENSITIVE 5-like | ||||
STRING | XP_004163678.1 | 1e-130 | (Cucumis sativus) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF24873 | 3 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36270.1 | 1e-18 | bZIP family protein |