PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MELO3C007655P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family | bZIP | ||||||||
Protein Properties | Length: 210aa MW: 24575.6 Da PI: 8.6234 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.9 | 3.8e-12 | 91 | 135 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ rr+++NRe+ArrsR+RK++ +e+L++ v +L+ eN++L ++l MELO3C007655P1 91 RKRRRMESNRESARRSRLRKQKHLENLRNLVNKLKVENRELSNRL 135 57899************************************9665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.8E-9 | 84 | 135 | No hit | No description |
SMART | SM00338 | 6.3E-13 | 87 | 151 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.07 | 89 | 152 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-9 | 91 | 136 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.24E-9 | 91 | 139 | No hit | No description |
CDD | cd14702 | 1.70E-16 | 92 | 136 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 94 | 109 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
MLSASPTGSP YESMLENPFP AASTPWECHD YHNHGFLPGF FQMPEQPELL DVLQSPNPVI 60 SSSSSENRDE PEALDPGPCE PDRKVEVVDE RKRRRMESNR ESARRSRLRK QKHLENLRNL 120 VNKLKVENRE LSNRLRFTIY EVNRVRTEND HLQTEHTILR RKLMCSRQLL IFRQYQRQLG 180 YNAFEKPPTI SQSQSQYILN NNNNNLINC* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 90 | 94 | RKRRR |
2 | 90 | 111 | RKRRRMESNRESARRSRLRKQK |
3 | 103 | 109 | RRSRLRK |
4 | 103 | 110 | RRSRLRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681875 | 0.0 | LN681875.1 Cucumis melo genomic scaffold, anchoredscaffold00007. | |||
GenBank | LN713262 | 0.0 | LN713262.1 Cucumis melo genomic chromosome, chr_8. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022950362.1 | 5e-93 | bZIP transcription factor RISBZ2-like | ||||
TrEMBL | A0A0A0KJR4 | 1e-119 | A0A0A0KJR4_CUCSA; Uncharacterized protein | ||||
STRING | XP_008440425.1 | 1e-153 | (Cucumis melo) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 4e-25 | basic leucine-zipper 6 |