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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C007444P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
GRAS |
Protein Properties |
Length: 542aa MW: 60045.8 Da PI: 6.3756 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C007444P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 414 | 1.3e-126 | 171 | 541 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
+++L++cA+a++++dl+ a+ ++ l +++s gdp qR+ ay++e+L+arl rs+s +ykal+++e + sse +++++++++++P++kf++
MELO3C007444P1 171 QDTLIHCAQAIHDSDLNVATLFMDVLGQMVSVFGDPAQRVGAYLLEGLRARLERSGSAIYKALKCKEPT---SSELMSYMSILFQICPYFKFGYT 262
689*****************************************************************9...999******************** PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
aN I ea+ +e +HiiDf+i qG Q+++L+q La+Rp+gpp lRiTgv++++s + l+ +g++La++A++ g+pf+f++ +a + d
MELO3C007444P1 263 SANAVIWEAMVNEPIIHIIDFQIAQGSQYISLIQDLANRPGGPPaLLRITGVDDSQSAhaRGGGLQIVGQNLAQLAQSKGIPFQFHA-AAMSGCD 356
****************************************8888789*******9988889999***********************.89999** PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
+e ++L ++pgEalaVn+ + lh+++desvs++++rd++L+lvkslsPkvv+++eqe+++n+++Fl rf+e+l+yy+a+f+s+++ +r++++ri
MELO3C007444P1 357 VEHSNLIIQPGEALAVNFPYTLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIIEQESNTNTSPFLLRFIETLDYYTAMFESIDVARSRDDKQRI 451
*********************************************************************************************** PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
E+++++r+ivn+vaceg+er+erhe l+kWr+r+++aGF+ p+s++++ ++ +lr ++++ yr++e +g+++lgWk+r++ ++SaWr
MELO3C007444P1 452 RAEQHCVARDIVNMVACEGFERVERHELLGKWRMRMRMAGFTLCPMSSSVTGAVRNMLRDFNEN-YRLQEVDGAIYLGWKNRAMATASAWR 541
**************************************************************55.*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 542 aa
Download sequence Send
to blast |
MQASHNRQAS SMIHEMDPYY LSRFHVLGNH VSSDASSQGN SVNFSSYKDQ FFTLESFPAT 60 ADLSGSNSPS AGSVLSSRSP FSPQGSQSCS SDQHHSFENT CGSPLSGCSV TDDDNDIKHK 120 LKELEISLLG PESDMVDSCY CSFRGGAHQD ASVARRNWNQ VVEMIPKLNL QDTLIHCAQA 180 IHDSDLNVAT LFMDVLGQMV SVFGDPAQRV GAYLLEGLRA RLERSGSAIY KALKCKEPTS 240 SELMSYMSIL FQICPYFKFG YTSANAVIWE AMVNEPIIHI IDFQIAQGSQ YISLIQDLAN 300 RPGGPPALLR ITGVDDSQSA HARGGGLQIV GQNLAQLAQS KGIPFQFHAA AMSGCDVEHS 360 NLIIQPGEAL AVNFPYTLHH MPDESVSTQN HRDRLLRLVK SLSPKVVTII EQESNTNTSP 420 FLLRFIETLD YYTAMFESID VARSRDDKQR IRAEQHCVAR DIVNMVACEG FERVERHELL 480 GKWRMRMRMA GFTLCPMSSS VTGAVRNMLR DFNENYRLQE VDGAIYLGWK NRAMATASAW 540 R*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |