PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C006054P2
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 420aa    MW: 44342.6 Da    PI: 9.4996
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C006054P2genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.51.2e-22283345163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     ekelkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN a ++e+++l+++++klk+e+
  MELO3C006054P2 283 EKELKRERRKQSNRESARRSRLRKQAETEELARKVDSLTAENVAIRSEISRLSENSEKLKKEN 345
                     89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.5E-34198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.2E-26133265No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-16277343No hitNo description
SMARTSM003388.3E-21283347IPR004827Basic-leucine zipper domain
PfamPF001701.1E-20283345IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.231285348IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.5E-10286342No hitNo description
CDDcd147028.46E-21288336No hitNo description
PROSITE patternPS000360290305IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MGTSEEAKSV KTEKPSSPTP PDQNGVPNSA SIHVFPDWAA MQAYYGPRVA VPPYYNSAVA  60
SGHAPHPYMW GPPQMIPPYG TPYAAIYSHG GVYAHPAVSM GPHSHAPGVP SSPAAATPLS  120
IETPSKVSGN SSQGLMKKLK GFDGLAMSIG NVSTESAEGG AEHGQSESME TEGSSDGSDG  180
TTAGASHNKR KRSREGTPTT GGKDAKIEPQ ASPVTAAEMN ESSSKLLGTT KAVNATGKLG  240
SVISPGMSTA LELRNPSSMN AMTSPTTVPP CSVLPSEVWL QNEKELKRER RKQSNRESAR  300
RSRLRKQAET EELARKVDSL TAENVAIRSE ISRLSENSEK LKKENSTLME KLKSAQSGRS  360
EALDMNEKKM QQPVSAEMKG PVNKSISEES IICKKNSSSG AKLRQLLDTS PRADAVAAS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1299305RRSRLRK
2299306RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818481e-132LN681848.1 Cucumis melo genomic scaffold, anchoredscaffold00006.
GenBankLN7132601e-132LN713260.1 Cucumis melo genomic chromosome, chr_6.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008437949.10.0PREDICTED: common plant regulatory factor 1 isoform X2
SwissprotQ990891e-130CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A1S3AV690.0A0A1S3AV69_CUCME; common plant regulatory factor 1 isoform X2
TrEMBLE5GCG90.0E5GCG9_CUCME; Bzip transcription factor
STRINGXP_008437947.10.0(Cucumis melo)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-109G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]