|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MELO3C005834P1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
Family |
GRAS |
Protein Properties |
Length: 599aa MW: 65382.6 Da PI: 6.2874 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C005834P1 | genome | MELONOMICS | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 354.6 | 1.5e-108 | 234 | 598 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97
+ ++e+A+a+s+g+le +++La + ++++ +g+++qRla y++ AL++r++ ++ +pp + +e+ aa++l+++vsP++k+++++
MELO3C005834P1 234 QSVIEAATAISEGKLEGLDEILAPVVKISNARGNSVQRLAEYMVLALKSRVNP-----VE-FPPPVVE-IYGDEHSAATQLLYDVSPCFKLAFMA 321
6789************************************************9.....33.3332222.34999********************* PP
GRAS 98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
aN aIlea+ +e +++H++Dfdi++G+Q+++L++ L+ R++g+ ++++T+v+ e+g e+l+ +ge L+++A+elgv f+fn+ v ++l++l+
MELO3C005834P1 322 ANLAILEAIGEEdRKLHVVDFDIGKGGQYMNLIHLLSGRQKGKVTVKLTAVVM-ENGGDESLKLVGESLTQLANELGVGFNFNI-VRHKLSELTR 414
*********9997888************************************9.77899************************9.799******* PP
GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
e+L ++ +E+laVn++++l+r++desvs+e++rde+L+ vksl P vv+v+eqe+++n+++F++r++e++ yys+lfds++++++r++++r+kvE
MELO3C005834P1 415 ESLGCELDESLAVNFAFKLYRMPDESVSTENPRDELLRRVKSLAPAVVTVMEQELNMNTAPFVARVTESCTYYSSLFDSIDSTVHRNHSDRVKVE 509
*********************************************************************************************** PP
GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ lgr++ n +aceg++r+er+e +kWr+r+++aGF++ ++s+++a+++k+ l+ + + g++v+ee+g +++gW++r+L++++aWr
MELO3C005834P1 510 EG-LGRKLANSLACEGRDRVERCEVSGKWRARMGMAGFEARAMSQTVAESMKTRLSSGYrvNPGFTVKEENGGICFGWMGRTLTVTTAWR 598
**.*************************************************99887655889**************************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 599 aa
Download sequence Send
to blast |
MQSGFTGGGA PDFYTAGRSM SSNPSQQNAY RSQLSGGSFI DPAATQIARQ IPSSLLGKRN 60 LADLHSHNQH NHHNLPLNNL FLRSVKPRAF NHPISPLSNL DFYSTMTLPS PDVQAHRLYG 120 TSSGALLQQL RQQPNGGIPV RDLQSLESEK KMMNHRLQEL EKELLEDNDD DDGSDAVSVI 180 TSSNSAWCET IYNLISPNPS PTAQNPSPTS SASSSCSSST SSSVASPASD SWKQSVIEAA 240 TAISEGKLEG LDEILAPVVK ISNARGNSVQ RLAEYMVLAL KSRVNPVEFP PPVVEIYGDE 300 HSAATQLLYD VSPCFKLAFM AANLAILEAI GEEDRKLHVV DFDIGKGGQY MNLIHLLSGR 360 QKGKVTVKLT AVVMENGGDE SLKLVGESLT QLANELGVGF NFNIVRHKLS ELTRESLGCE 420 LDESLAVNFA FKLYRMPDES VSTENPRDEL LRRVKSLAPA VVTVMEQELN MNTAPFVARV 480 TESCTYYSSL FDSIDSTVHR NHSDRVKVEE GLGRKLANSL ACEGRDRVER CEVSGKWRAR 540 MGMAGFEARA MSQTVAESMK TRLSSGYRVN PGFTVKEENG GICFGWMGRT LTVTTAWR*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |