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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
MELO3C005239P1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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| Family |
BBR-BPC |
| Protein Properties |
Length: 281aa MW: 31172.7 Da PI: 10.0992 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C005239P1 | genome | MELONOMICS | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 329.4 | 1e-100 | 1 | 280 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslk.enlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkl 81
mddd+ + rn+gyyep+ +k ++lglqlms+i+erd k r+ + + + ++++++rd m++ rd++ + ++++
MELO3C005239P1 1 MDDDALNMRNWGYYEPS--FKgNHLGLQLMSTISERDMKHflpgRDPSV-MVNANGSFHPRDcvvseapvhMNY-VRDNWGGN--------RDRF 83
9***9999*******99..66257***************99*9999999.9***********888888888888.77888777........789* PP
GAGA_bind 82 lalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskk 176
l++l++++s + v+++t+ ++slq l++++ ++++ a +ee + +++ k kk++++++ pk++kakk++k + k
MELO3C005239P1 84 LNMLPANHS--------YPVMPETSGAHSLQI-----LQPPSSS---RDEIAASRVEEPPVKKEGGKAKKRQSSEAGPKTPKAKKPRK-P----K 157
*****9997........8899*******9999.....5554444...33344555555444444444455555566677777777777.1....2 PP
GAGA_bind 177 kvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLek 271
+++++ +r+k +kk+idlv+ng+++D+s +P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP+s krrgaRiagrKmSqgafkk+Lek
MELO3C005239P1 158 DTSTAV--QRVKPPKKNIDLVINGIDMDISCIPIPVCSCTGAPHQCYRWGCGGWQSACCTTNISTYPLPMSDKRRGARIAGRKMSQGAFKKVLEK 250
223333..689************************************************************************************ PP
GAGA_bind 272 LaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
Laa+Gy+++np+DL++hWA+HGtnkfvtir
MELO3C005239P1 251 LAADGYNFANPIDLRTHWARHGTNKFVTIR 280
*****************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MDDDALNMRN WGYYEPSFKG NHLGLQLMST ISERDMKHFL PGRDPSVMVN ANGSFHPRDC 60
VVSEAPVHMN YVRDNWGGNR DRFLNMLPAN HSYPVMPETS GAHSLQILQP PSSSRDEIAA 120
SRVEEPPVKK EGGKAKKRQS SEAGPKTPKA KKPRKPKDTS TAVQRVKPPK KNIDLVINGI 180
DMDISCIPIP VCSCTGAPHQ CYRWGCGGWQ SACCTTNIST YPLPMSDKRR GARIAGRKMS 240
QGAFKKVLEK LAADGYNFAN PIDLRTHWAR HGTNKFVTIR *
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
