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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
MELO3C005238P1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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| Family |
BBR-BPC |
| Protein Properties |
Length: 278aa MW: 30971.6 Da PI: 10.5157 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C005238P1 | genome | MELONOMICS | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 314.9 | 2.7e-96 | 1 | 277 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82
md d+ + rn+gyyep+ lk +lglql+s+i erd k r+ + + + +aa+++rd ++ rd ++++ ++kl+
MELO3C005238P1 1 MDGDALNMRNWGYYEPS--LKAHLGLQLVSTIGERDVKHfmpgRDPSA-IVNMNAAFHPRDsvvseapvsTNW-ARDGWMNQ--------RDKLF 83
99999988*******99..*******************9999766666.9***********888888886666.78888888........67888 PP
GAGA_bind 83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
++l ++s ++ l +t+ ++ lq+ l+ + ++++ e +l+ie +++++k +k++kkrq++ pk++k kk++k + k
MELO3C005238P1 84 NVLSPNTS--------YSLLAETSAAQPLQM-----LQ--PLDTSRDE--MVLKIE-EPPVKKGTKQPKKRQNGGAPKSPKPKKPRK--P----K 154
88886765........88999******9999.....33..34433444..345554.4888999999******************99..2....3 PP
GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
++ +s +++ka+kk+++lv+ng ++D+s++P+PvCsCtG+++qCY+WG GGWqSaCCtt++S +PLP+s krrgaRiagrKmSqgafkk+LekL
MELO3C005238P1 155 SNDPSF-QQVKAPKKKMELVINGFDMDISSIPIPVCSCTGTPHQCYRWGYGGWQSACCTTSLSLHPLPMSEKRRGARIAGRKMSQGAFKKVLEKL 248
344443.579************************************************************************************* PP
GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
aa+Gy++snp+DL++hWA+HGtnkfvtir
MELO3C005238P1 249 AAQGYNFSNPIDLRSHWARHGTNKFVTIR 277
****************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MDGDALNMRN WGYYEPSLKA HLGLQLVSTI GERDVKHFMP GRDPSAIVNM NAAFHPRDSV 60
VSEAPVSTNW ARDGWMNQRD KLFNVLSPNT SYSLLAETSA AQPLQMLQPL DTSRDEMVLK 120
IEEPPVKKGT KQPKKRQNGG APKSPKPKKP RKPKSNDPSF QQVKAPKKKM ELVINGFDMD 180
ISSIPIPVCS CTGTPHQCYR WGYGGWQSAC CTTSLSLHPL PMSEKRRGAR IAGRKMSQGA 240
FKKVLEKLAA QGYNFSNPID LRSHWARHGT NKFVTIR*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
