PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla023158
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family ERF
Protein Properties Length: 231aa    MW: 25669.5 Da    PI: 5.4997
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla023158genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.7e-182272155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  Cla023158 22 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 72
               59*****998.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.59E-212281No hitNo description
PfamPF008471.4E-112372IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-192380IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.8E-302381IPR001471AP2/ERF domain
PROSITE profilePS5103221.7732380IPR001471AP2/ERF domain
SMARTSM003802.4E-342386IPR001471AP2/ERF domain
PRINTSPR003671.6E-82435IPR001471AP2/ERF domain
PRINTSPR003671.6E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MVKKVEKTAV ESSPAQLPPC KKKYKGVRMR SWGSWVSEIR APNQKTRIWL GSYSTPEAAA  60
RAYDAALLCL KGASASLNFP EIANSISISD NRHFLHHHHH HHHIDTSDNA IMSPKSIQRV  120
AAAAANGFPE NVGTVVTPPS SSASSPSDSS SPSDQPDDDV SVIVTSDSFY DQFDHPTAEM  180
ESWCNYLDAL QSPKYIDQML TGAWFDFDSM PEAKIDNFYE EESDIRLWSF C
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023525576.11e-106ethylene-responsive transcription factor ERF014-like
TrEMBLA0A1S3BAF21e-104A0A1S3BAF2_CUCME; ethylene-responsive transcription factor ERF014
STRINGXP_008444140.11e-105(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47983156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.13e-34ERF family protein