PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla022943
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 367aa    MW: 41295.9 Da    PI: 9.1616
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla022943genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.82e-072382841763
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                A+rsR RK+++i+eLe+ v++L+a  ++   ele l+++   l +e+
  Cla022943 238 AQRSRVRKLQYIAELERNVQALQANGSEVSAELEFLSQQNLILGMEN 284
                89**********************************99998888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0046227286IPR004827Basic-leucine zipper domain
CDDcd147037.20E-14231277No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-7238278No hitNo description
SuperFamilySSF579594.99E-5238280No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MENSKVLSNM RNMIYSGKHA LLPPKSPLPS GSSSYADYFP NPIIGSRAVQ NPREGNVHHH  60
RTSSESLVME EQPSWLDDLL NEPETPVQRG GHRRSSSDSF AYLDAGNVSN ENYTQDDSQC  120
KNMYLPSWAS QDFDSHQASF HMKASWIKQK NRTRELPPTT LTTNPGARSS AKSSILLESS  180
RSLSTTPQEA NGFSSTTEKQ DSAETGLPDR KPSERMDSSH VKPGLADTDN KRAKQQFAQR  240
SRVRKLQYIA ELERNVQALQ ANGSEVSAEL EFLSQQNLIL GMENKALKQR LESLSQEQLI  300
KYLEHEVLER EIGRLRMLYQ QQQQPQPPPS SLKRTKSRDL ETQFAKLSLR QKDARSGSES  360
VAGPVQI
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818960.0LN681896.1 Cucumis melo genomic scaffold, anchoredscaffold00016.
GenBankLN7132640.0LN713264.1 Cucumis melo genomic chromosome, chr_10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008445999.10.0PREDICTED: uncharacterized protein At4g06598 isoform X1
TrEMBLA0A1S3BEP80.0A0A1S3BEP8_CUCME; uncharacterized protein At4g06598 isoform X1
STRINGXP_008445999.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.29e-89bZIP family protein