PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cla021203 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family | WRKY | ||||||||
Protein Properties | Length: 123aa MW: 14049.7 Da PI: 8.0506 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31.8 | 2.9e-10 | 94 | 114 | 1 | 21 |
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK vk s +p Cla021203 94 LDDGYRWRKYGQKAVKHSLHP 114 59****************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.1E-10 | 82 | 114 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.44E-8 | 87 | 116 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 11.692 | 89 | 114 | IPR003657 | WRKY domain |
SMART | SM00774 | 0.0094 | 94 | 122 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-6 | 95 | 114 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence Send to blast |
MEEYGKLQYP PPPPSPPPPC SDPDATPLEI DWIAVLSDQE VTGDLAAAAA TCESSETRRD 60 EEKGERRKKG GRRWRRTAGC RRFEFQTRSA EDILDDGYRW RKYGQKAVKH SLHPSIFNNQ 120 AKF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004134318.1 | 6e-47 | PREDICTED: probable WRKY transcription factor 43 | ||||
TrEMBL | A0A0A0L635 | 1e-45 | A0A0A0L635_CUCSA; Uncharacterized protein | ||||
STRING | XP_004155886.1 | 2e-46 | (Cucumis sativus) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3227 | 34 | 71 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46130.2 | 2e-13 | WRKY DNA-binding protein 43 |