PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla021140
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family Dof
Protein Properties Length: 171aa    MW: 18062.1 Da    PI: 8.9924
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla021140genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.6e-392482260
     zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
               ++++l+cprC+s+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rkn+k
  Cla021140 24 PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 82
               6899*****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-252382IPR003851Zinc finger, Dof-type
PfamPF027012.7E-332682IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.9012882IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103066IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MEAMMESGSG GGGGGGGLKG KGRPQEQLNC PRCKSSNTKF CYYNNYSLTQ PRYFCKSCRR  60
YWTEGGSLRN IPVGGGSRKN RKPPGPVVGG SGSAHHAPPL PQVYQAHDLN LGFATAEATA  120
TTMGMENGGH GGFGCYIPNL MPYSARDTAA VEENSGNNGY WNGMFGGGPP W
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016898925.12e-91PREDICTED: dof zinc finger protein DOF3.7
TrEMBLA0A1S4DT964e-90A0A1S4DT96_CUCME; dof zinc finger protein DOF3.7
STRINGXP_008437866.17e-91(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67434137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.34e-35Dof family protein