PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla019229
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family NAC
Protein Properties Length: 367aa    MW: 42542.8 Da    PI: 4.6171
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla019229genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.88.8e-1971351128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                lp G+ F+Ptd+el+++yL +k+ g+ ++   v++ +d+y  eP+++  ++   + +++yfF++ +kk+++  rk    + ++W+   k ++v+s+ +++
  Cla019229   7 LPIGYTFSPTDQELLSFYLFHKIVGDFVPP-FVLPIIDLYGQEPSQIWqQCGGIDGQDIYFFTTLKKKKSRVVRKVG-SNGATWSGENKANKVFSStNNA 104
                699***********************9888.689*************735555688899******999875544444.35678**********9986778 PP

        NAM  99 lvglkktLvfykg.rapkgektdWvmheyrl 128
                l+g  k + + +   + + ++ +W+m ey+l
  Cla019229 105 LIGSVKRFHYENSkVKVEDNHYSWIMYEYTL 135
                8*******99954256677899*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.15E-242157IPR003441NAC domain
PROSITE profilePS5100527.8437157IPR003441NAC domain
PfamPF023651.0E-138135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MMNSNMLPIG YTFSPTDQEL LSFYLFHKIV GDFVPPFVLP IIDLYGQEPS QIWQQCGGID  60
GQDIYFFTTL KKKKSRVVRK VGSNGATWSG ENKANKVFSS TNNALIGSVK RFHYENSKVK  120
VEDNHYSWIM YEYTLDPNFV PKGVVHDSFV LCMLRKKILK QEKRTFSTTI QTSVSHNWPT  180
TQMVVCDDPN PKRRKLEERQ LVNLENEFCI NGVNFENQAC VDTGRFTEDE MQQFIDGYNL  240
EPNQLGENII QPLMTENQTG MGYLMNQPYD NVEAANACPI MQMEPHDRYD SIDETVLAKD  300
IEMGLQQTFN YEESSKREKD SNYDHECPTT QVKSYDHYSI DDDIFAKELE MALEPCNDVE  360
LQNREKY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0A0LWA53e-84A0A0A0LWA5_CUCSA; Uncharacterized protein
STRINGXP_004170453.19e-88(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.12e-13NAC domain containing protein 96