PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla019114
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family ZF-HD
Protein Properties Length: 92aa    MW: 10109.3 Da    PI: 8.7756
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla019114genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.21.6e-322581360
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                  vrY eC+kNhAa+lGg avDGC+Efm+  ge+gt +al+CaACgCHRnFHRrev+ e
    Cla019114 25 VVRYAECQKNHAAKLGGFAVDGCREFMAR-GEDGTEEALNCAACGCHRNFHRREVDAE 81
                 79**************************8.999*********************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047708.9E-302678IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257744.0E-262690IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015667.5E-272778IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152325.3622877IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048509Biological Processregulation of meristem development
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MKKRLVVVKK SDGSSGRRRS GSSSVVRYAE CQKNHAAKLG GFAVDGCREF MARGEDGTEE  60
ALNCAACGCH RNFHRREVDA EVVFEYSPPN SN
Functional Description ? help Back to Top
Source Description
UniProtInhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. Promotes the formation of ectopic shoot meristems on leaf margins. {ECO:0000269|PubMed:21455630}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818132e-84LN681813.1 Cucumis melo genomic scaffold, anchoredscaffold00030.
GenBankLN7132562e-84LN713256.1 Cucumis melo genomic chromosome, chr_2.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022135253.12e-56mini zinc finger protein 3-like
SwissprotQ2Q4932e-35MIF3_ARATH; Mini zinc finger protein 3
TrEMBLA0A0A0LSA64e-54A0A0A0LSA6_CUCSA; Uncharacterized protein
TrEMBLA0A1S3BWG15e-54A0A1S3BWG1_CUCME; mini zinc finger protein 3-like
STRINGXP_008453204.19e-55(Cucumis melo)
STRINGXP_004138166.17e-55(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF155034100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.18e-37mini zinc finger