PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla015873
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 565aa    MW: 61717.1 Da    PI: 6.2102
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla015873genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.53.8e-10422479562
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +  l+++
  Cla015873 422 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 479
                9********************************************9998877666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.2E-18418482IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.737420483IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.09E-11422473No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-10422478No hitNo description
PfamPF001706.7E-9422476IPR004827Basic-leucine zipper domain
CDDcd147031.51E-24423472No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 565 aa     Download sequence    Send to blast
MGDTEDANTE NMRNLQCSYG VSSSSAGNLP FSMDQLKISQ MNCSQIRPPH FQSNFLADNS  60
RRIGIPPSPN SPQIPPISPY SQIPISRPMN QQNYNPVPTH SRSLSQPSFF SLDSLPPLSP  120
SPFRESPTTS NSDQVSADTS MEDRDNSSHS LLPPSPYMRA NSSKMGDSLP PRKAHRRSSS  180
DIPFGLSSMI QPSPLLPFNS SGGLERSISS KENAGLLKPA SQFVKREPSL EKSVDNNLEG  240
MGERKSDGDS VDDLFSAYMN LDNIDLFNSS GTNDKNGQEN REDLDSRGSG TKTNGGESSD  300
NEAESSVNES GDSAQMPGLN SSAEKREGIK RTAGGDIAPT TRHYRSVSMD SFMGKLQFGD  360
ESPKMPPTPP GVRPGQLSSN NLVDGNSAPF SLEFGNGEFS GAELKKIMAN DKLAEIALTD  420
PKRAKRILAN RQSAARSKER KMRYISELEH KVQTLQTEAT TLSAQLTLLQ RDSVGLTNQN  480
NELKFRLQAM EQQAQLRDAL NEALTAEVQR LKLATTELNA QSHPSNGVMP QSSINHHGLQ  540
LQLQHQQQQQ IQQNGNATTK PESNQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6817980.0LN681798.1 Cucumis melo genomic scaffold, anchoredscaffold00019.
GenBankLN7132550.0LN713255.1 Cucumis melo genomic chromosome, chr_1.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008448027.10.0PREDICTED: uncharacterized protein LOC103490334
RefseqXP_008448028.10.0PREDICTED: uncharacterized protein LOC103490334
TrEMBLA0A1S3BJD50.0A0A1S3BJD5_CUCME; uncharacterized protein LOC103490334
STRINGXP_008448027.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-136bZIP family protein