PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla014367
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family G2-like
Protein Properties Length: 195aa    MW: 21125.9 Da    PI: 7.9395
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla014367genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.43.3e-334296155
    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               kprlrWt +LHerFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  Cla014367 42 KPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 96
               79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.8E-323997IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-234297IPR006447Myb domain, plants
SuperFamilySSF466894.12E-174298IPR009057Homeodomain-like
PfamPF002491.3E-74495IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MFPRLVNPDG DIQIHGPRGS VASDLTHSHR GDPCLVLTSD PKPRLRWTAD LHERFVDAVT  60
QLGGAGKATP KAIMRTMNVK GLTLFHLKSH LQKYRLGKQS GKDMGEASKD VNGTEEVQAN  120
LPCQRADCST ESCLTSNESP GGLAMEKSPV ASKKNMVNLD SATASLIWGE AKERIQDANI  180
IQVNHHGVSG CDMWG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A4e-204298157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-204298157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-204298157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-204298157Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818751e-115LN681875.1 Cucumis melo genomic scaffold, anchoredscaffold00007.
GenBankLN7132621e-115LN713262.1 Cucumis melo genomic chromosome, chr_8.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011658094.11e-75PREDICTED: protein PHR1-LIKE 1-like isoform X1
TrEMBLA0A0A0KL093e-74A0A0A0KL09_CUCSA; Uncharacterized protein
TrEMBLA0A1S4DTK93e-74A0A1S4DTK9_CUCME; LOW QUALITY PROTEIN: myb family transcription factor APL-like
STRINGXP_008440945.15e-75(Cucumis melo)
STRINGXP_004134996.18e-73(Cucumis sativus)
STRINGXP_004163406.17e-73(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF66183349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.14e-43G2-like family protein