PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cla013537 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family | G2-like | ||||||||
Protein Properties | Length: 134aa MW: 15069.6 Da PI: 6.2784 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.6 | 2.4e-32 | 64 | 117 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ Cla013537 64 PRLRWTPDLHLAFVNAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 117 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.0E-30 | 60 | 118 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 12.297 | 60 | 120 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 6.81E-15 | 62 | 118 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.4E-24 | 64 | 119 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 9.2E-10 | 65 | 116 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence Send to blast |
MINGFDLNEE AKGIDEGFGE ENSNNSNSNT SSNNGSMEEA EKEEEEEEQR RSGSVRKYSR 60 SKMPRLRWTP DLHLAFVNAV ERLGGQERAT PKLVLQLMNV RGLSIAHVKS HLQMYRSKKL 120 DESGQGRVSN SITS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 7e-21 | 65 | 119 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 7e-21 | 65 | 119 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 7e-21 | 65 | 119 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 7e-21 | 65 | 119 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 7e-21 | 65 | 119 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 7e-21 | 65 | 119 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 7e-21 | 65 | 119 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 7e-21 | 65 | 119 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 7e-21 | 65 | 119 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 7e-21 | 65 | 119 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 7e-21 | 65 | 119 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 7e-21 | 65 | 119 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681918 | 1e-71 | LN681918.1 Cucumis melo genomic scaffold, anchoredscaffold00020. | |||
GenBank | LN713265 | 1e-71 | LN713265.1 Cucumis melo genomic chromosome, chr_11. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008448246.1 | 5e-59 | PREDICTED: probable transcription factor KAN2 isoform X2 | ||||
Refseq | XP_011657091.1 | 4e-59 | PREDICTED: probable transcription factor KAN4 isoform X2 | ||||
Refseq | XP_022947230.1 | 2e-58 | uncharacterized protein LOC111451155 | ||||
Refseq | XP_022947231.1 | 2e-58 | uncharacterized protein LOC111451155 | ||||
Refseq | XP_023533211.1 | 2e-58 | uncharacterized protein LOC111795167 | ||||
Swissprot | Q700D9 | 1e-28 | MYBF_ARATH; Putative Myb family transcription factor At1g14600 | ||||
TrEMBL | A0A0A0KBB2 | 5e-55 | A0A0A0KBB2_CUCSA; Uncharacterized protein | ||||
TrEMBL | A0A1S3BJ91 | 1e-57 | A0A1S3BJ91_CUCME; probable transcription factor KAN2 isoform X2 | ||||
STRING | XP_004162479.1 | 9e-56 | (Cucumis sativus) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3012 | 32 | 70 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 8e-39 | G2-like family protein |