PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla012465
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family ERF
Protein Properties Length: 184aa    MW: 20461.9 Da    PI: 4.8965
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla012465genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-181565155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               s y+GVr +k +g+Wv+eIr+p   gk++r++lg+f t+e+Aa+a++ a+  ++g
  Cla012465 15 SSYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDVAAYHFRG 65
               67*****999.**********8...557**********************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.2E-121565IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-231574IPR016177DNA-binding domain
CDDcd000188.57E-241575No hitNo description
Gene3DG3DSA:3.30.730.102.6E-321674IPR001471AP2/ERF domain
SMARTSM003801.8E-391679IPR001471AP2/ERF domain
PROSITE profilePS5103223.961673IPR001471AP2/ERF domain
PRINTSPR003673.7E-101728IPR001471AP2/ERF domain
PRINTSPR003673.7E-103955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MGEPSSMGSH GGATSSYRGV RKRKWGKWVS EIREPGKKTR IWLGSFETPE MAAAAYDVAA  60
YHFRGRDARL NFPHLVNSLP FPLSSTPDDI RVAAHEAALR LRTTPAVVSE GEESSASGLA  120
PITVRLSPSQ IQAINESTLD SPKMWMQMSS ESLLMEEFSN GTVFVDDMDD EMWENMHNDS  180
LWDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-181778668ATERF1
3gcc_A2e-181778668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008459604.11e-119PREDICTED: ethylene-responsive transcription factor ERF021
SwissprotQ9C9I21e-63ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A1S3CB311e-117A0A1S3CB31_CUCME; ethylene-responsive transcription factor ERF021
STRINGXP_008459604.11e-118(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.13e-54ERF family protein