PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla005370
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family BES1
Protein Properties Length: 311aa    MW: 33198.9 Da    PI: 8.9922
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla005370genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822207.82.9e-6421451150
     DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslks 100
                ++++r ptw+ErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g sa asp +s q     
  Cla005370   2 TSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPYASHQ----- 96 
                5899*****************************************************************************************88..... PP

     DUF822 101 salaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                   +sp++s ++sp sssfpsp+s++ + + +a  +sl+p+l++ls++sss+
  Cla005370  97 ---PSPCASFNPSPGSSSFPSPASSSYVGNPNAdgSSLIPWLKNLSTSSSSA 145
                ...*******************9999887766677**********9977764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.9E-653139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MTSGTRLPTW RERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPIERM DVVGGSAAAS PYASHQPSPC ASFNPSPGSS SFPSPASSSY  120
VGNPNADGSS LIPWLKNLST SSSSASSSKL PNHYIHGGSI SAPVTPPLSS PTARTPRLKA  180
DWEDQSVLPG WSAQYYSSQP SSTPPSPGRQ ILPNPEWFAG LRIPQGGPNS PTFSLVSTNP  240
FGFKEAAMTG GGSRMWTPGQ SGTCSPAIAA GSDHTADIPM SEVISDEFAF GSNAAGRVKP  300
WEGERIHDEC G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818730.0LN681873.1 Cucumis melo genomic scaffold, anchoredscaffold00027.
GenBankLN7132610.0LN713261.1 Cucumis melo genomic chromosome, chr_7.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022142803.11e-180BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-128BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A0A0KXL01e-178A0A0A0KXL0_CUCSA; Uncharacterized protein
TrEMBLA0A1S3BRM11e-178A0A1S3BRM1_CUCME; BES1/BZR1 homolog protein 4
STRINGXP_008451746.11e-178(Cucumis melo)
STRINGXP_004137229.11e-179(Cucumis sativus)
STRINGXP_004156512.11e-179(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-109BES1/BZR1 homolog 4