PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla005059
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family Dof
Protein Properties Length: 285aa    MW: 31739.8 Da    PI: 8.3877
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla005059genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.81.6e-401879263
     zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
               +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  Cla005059 18 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSSS 79
               7899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-271671IPR003851Zinc finger, Dof-type
PfamPF027012.1E-342076IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.6552276IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102460IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MMVCQNSKDQ IRKPRPQPEQ ALKCPRCDST NTKFCYYNNY SLSQPRYFCK SCRRYWTQGG  60
TLRNVPVGGG CRKNKRSSST NSSTSSSKKS QDHPFGSGGL PHLSYDHQAH DLSLAFARLH  120
KNSCGSGSGP AFNDFDFSIL GMPNGDVLNG FGYNSQSMYY GNDNNMGGIE SNGDQMRLQP  180
YDQDHHHHHN QQYSNATTTA VTVTTMKQEL FGGRDINGGD QSKILWGYPN WQMNNNNNAI  240
DSNTTTTTTM MAAMDFDSGS ARESWNNNAF TNASSWHGLL NSPLM
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6855681e-130LN685568.1 Cucumis melo genomic scaffold, unassembled_sequence33115.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004147273.11e-150PREDICTED: dof zinc finger protein DOF2.1-like
TrEMBLA0A0A0LSJ81e-149A0A0A0LSJ8_CUCSA; Uncharacterized protein
STRINGXP_004147273.11e-150(Cucumis sativus)
STRINGXP_004163964.11e-150(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50263051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-36TARGET OF MONOPTEROS 6