PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cla000632

Organism

Citrullus lanatus

Taxonomic ID

3654

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus

Family

VOZ

Protein Properties

Length: 473aa MW: 52939.8 Da PI: 6.1585

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cla000632	genome	ICuGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	427.3	2.3e-131	216	432	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsl 100 pppsaf+gp calwdc+rpaqgs+w+qdycss+h++la+neglpg+ p+lrp+gi++kdg+lfaal+ak+q+kevgip c+gaat+kspwna+elfd+++ Cla000632 216 PPPSAFMGPICALWDCFRPAQGSKWCQDYCSSCHSVLAINEGLPGMIPILRPGGIGFKDGPLFAALHAKTQAKEVGIPICDGAATRKSPWNAPELFDITF 315 89************************************************************************************************ PP VOZ 101 legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkv 200 legetirewl+fdkprrafesgnr+qrslpdysgrgwhesrk vmkefgg+k+syymdpqpsss+ewhlyey+i+++d++alyrlelk+vd+kk +kgk+ Cla000632 316 LEGETIREWLYFDKPRRAFESGNRRQRSLPDYSGRGWHESRKLVMKEFGGQKKSYYMDPQPSSSLEWHLYEYDITNYDSFALYRLELKHVDAKKIPKGKL 415 ************************************************************************************************ PP VOZ 201 skdsladlqkklgrlta 217 ++d+ladlqkk+grlta Cla000632 416 AADPLADLQKKMGRLTA 432 *************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence Send to blast
MPKGLKSKCQ STSHQLLKEK AKNRVNDLQG IFTNLQNARK ESRTTDVAVL EEQVHQMLRE 60 WNAELNEPSP ASSFVEGSLG SFSQELARLL EHCDEEDDAT SILAEPKAET ELHCVLASNP 120 SNCVQDGFCI PELQQDSFLG FEECKVSPPD LQNHSFYKLD MATQSICQSF KLDQNFENCH 180 ILNSHPEFDY GVLIGASDVG DFSQDTKPSI LPNISPPPSA FMGPICALWD CFRPAQGSKW 240 CQDYCSSCHS VLAINEGLPG MIPILRPGGI GFKDGPLFAA LHAKTQAKEV GIPICDGAAT 300 RKSPWNAPEL FDITFLEGET IREWLYFDKP RRAFESGNRR QRSLPDYSGR GWHESRKLVM 360 KEFGGQKKSY YMDPQPSSSL EWHLYEYDIT NYDSFALYRL ELKHVDAKKI PKGKLAADPL 420 ADLQKKMGRL TAEGPVELGQ PVKGKITTKT NNKKLDTANI NLAPHHQNMT NTN

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence Send to blast

MPKGLKSKCQ STSHQLLKEK AKNRVNDLQG IFTNLQNARK ESRTTDVAVL EEQVHQMLRE  60
WNAELNEPSP ASSFVEGSLG SFSQELARLL EHCDEEDDAT SILAEPKAET ELHCVLASNP  120
SNCVQDGFCI PELQQDSFLG FEECKVSPPD LQNHSFYKLD MATQSICQSF KLDQNFENCH  180
ILNSHPEFDY GVLIGASDVG DFSQDTKPSI LPNISPPPSA FMGPICALWD CFRPAQGSKW  240
CQDYCSSCHS VLAINEGLPG MIPILRPGGI GFKDGPLFAA LHAKTQAKEV GIPICDGAAT  300
RKSPWNAPEL FDITFLEGET IREWLYFDKP RRAFESGNRR QRSLPDYSGR GWHESRKLVM  360
KEFGGQKKSY YMDPQPSSSL EWHLYEYDIT NYDSFALYRL ELKHVDAKKI PKGKLAADPL  420
ADLQKKMGRL TAEGPVELGQ PVKGKITTKT NNKKLDTANI NLAPHHQNMT NTN

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	LN681916	0.0	LN681916.1 Cucumis melo genomic scaffold, anchoredscaffold00037.
GenBank	LN713265	0.0	LN713265.1 Cucumis melo genomic chromosome, chr_11.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008455940.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-169	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S3C2S3	0.0	A0A1S3C2S3_CUCME; transcription factor VOZ1-like
STRING	XP_008455940.1	0.0	(Cucumis melo)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-164	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]