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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.3264s0007.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
GRAS |
Protein Properties |
Length: 633aa MW: 72766.3 Da PI: 5.1836 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.3264s0007.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 346 | 6.2e-106 | 253 | 629 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPi 90
++lL+ cA+a+s+gd++ a lL ++++++sp gd+ qRla++f++AL+arl +s+ + ++ ++ ++ +++ s++l+a++++ sP+
Cagra.3264s0007.1.p 253 RTLLTLCAQAISTGDKTTALDLLMQIRQQSSPIGDAGQRLAHCFANALEARLEGSTGPMIQTYyNAITSLKETASDTLKAYRVYLSSSPF 342
6799**************************************************7666666654777888888***************** PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
+++ ++ ++Il+ + ++ +Hi+Df+i +G+QWp ++q ++ R++ p +lRiTg++ p+ g +e++eetg+rLa+++++++vpfe+
Cagra.3264s0007.1.p 343 VTLMYFFSFRMILDKSKDASVLHIVDFGILYGFQWPMFIQYISRRQDAPRKLRITGIELPQRGfrPTERIEETGRRLAEYCKRFNVPFEY 432
*************************************************************99*************************** PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
++++++++e++++e+L+++p+E+laV ++l++l de++s e+ +rd+vLkl+++++P+v++++ + + n++ F rf ea+++ysal
Cagra.3264s0007.1.p 433 KAIASQHWETIRIEDLDIRPNEVLAVTAGVRLKNLQDETGSEENcPRDAVLKLIRNMNPNVFIHSIVNGSFNAPFFISRFKEAVYHYSAL 522
**9999**************************************99******************************************** PP
GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesg 356
fd+++++lpr++eeri Ere+ gre++nv+ace+a+r+er et+++W+ r +aGF++ p++ ++++ + l+k + + + v+e+s+
Cagra.3264s0007.1.p 523 FDMFDSTLPRDNEERIRFEREFYGREAMNVIACEEADRVERPETYRQWQVRTVRAGFRQEPIRADMVELFRERLKKWGyHKDFVVDENSK 612
*****************************************************************************99999******** PP
GRAS 357 slvlgWkdrpLvsvSaW 373
+l++gWk+r+L++ S+W
Cagra.3264s0007.1.p 613 WLLQGWKGRTLYASSCW 629
***************** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 633 aa
Download sequence Send
to blast |
MDHNFSESLS GFDANPSYLS DPVEDQNTLL KYVSEILMEE SNGDYKQSMF YDSLALRKTE 60 EMFQQVIEED SQNQSFSADS IITTSCSCAG DASGSIVESV HSPDLLIGPA VDEIVVKSMF 120 SDADSALQFR KGVEEASKFL PNSDQWLINL ETERPERRDF AKEGMGLDPL RVKRSHEREV 180 IDFEEVRNSK QFATNVEDEK ITEVFDKVLL LDSECDPPTL LDGTIQDIRS NKQEGKGKKE 240 KKKKKKSQVV DFRTLLTLCA QAISTGDKTT ALDLLMQIRQ QSSPIGDAGQ RLAHCFANAL 300 EARLEGSTGP MIQTYYNAIT SLKETASDTL KAYRVYLSSS PFVTLMYFFS FRMILDKSKD 360 ASVLHIVDFG ILYGFQWPMF IQYISRRQDA PRKLRITGIE LPQRGFRPTE RIEETGRRLA 420 EYCKRFNVPF EYKAIASQHW ETIRIEDLDI RPNEVLAVTA GVRLKNLQDE TGSEENCPRD 480 AVLKLIRNMN PNVFIHSIVN GSFNAPFFIS RFKEAVYHYS ALFDMFDSTL PRDNEERIRF 540 EREFYGREAM NVIACEEADR VERPETYRQW QVRTVRAGFR QEPIRADMVE LFRERLKKWG 600 YHKDFVVDEN SKWLLQGWKG RTLYASSCWV PV*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 237 | 245 | KKEKKKKKK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |