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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cc07_g16860 |
| Common Name | GSCOC_T00037508001 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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| Family |
GRAS |
| Protein Properties |
Length: 348aa MW: 38884.4 Da PI: 4.8912 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cc07_g16860 | genome | CGSC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 206.4 | 1.6e-63 | 8 | 345 | 3 | 352 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdg...dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97
lLl Aea+++g+ +la+ + rl+++ s + +pm Rla yft++L + + a + e++ ++++++++a+++++e+sP++kf+h+t
Cc07_g16860 8 GLLLMGAEAIEAGNVRLASIVAPRLKDILSDQEngdNPMDRLALYFTQGLLDKSLT-------APEHPENPVSRQTNAISAFQMLQELSPYVKFAHFT 98
589999********************99555442257************9877666.......233333333457889******************** PP
GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
aNqaIlea+eg++++H+iDfd ++G+QWp+L+ La+R++ slRiT+++ ++gs+ ++++tg rL++fA++++++f+ + ++ k+ ed+ ee+
Cc07_g16860 99 ANQAILEATEGHREIHVIDFDFMEGIQWPSLMVDLAAREDA--SLRITAIVG-DKGSSCNIQQTGFRLQDFANSINLSFSSDQVLIKKEEDF--EEI- 190
**************************************765..9*******9.778***************************988877766..766. PP
GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyysalfdsl.eaklpreseerikvEre 288
k g +l+ n++++ ++++++ sl + ++ + +++lsPk++v+v++e ++ s+sF+ f+eal++y+al dsl + ++ + + + +Ere
Cc07_g16860 191 -KVGHTLIANCMINQLHMPHRESSLVE---TFFNGLRKLSPKILVFVQEElfsfSKAPSTSFAGFFCEALDHYTALSDSLrSGFFGGYKLALKIIERE 284
.6699**************88888888...********************7654455777********************777888888999****** PP
GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve 352
+l+ +i + v + ++ +e + + ++ GF+p+p+++ ++ qak+l++ +++ y v+
Cc07_g16860 285 FLRMQILDSVKHFPCG-IMGNE-SNMLPDYPSMNGFRPIPMNSCNVIQAKHLISLFNGS-YWVQ 345
**********998887.44444.45556777899*********************9955.6665 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MEESSLTGLL LMGAEAIEAG NVRLASIVAP RLKDILSDQE NGDNPMDRLA LYFTQGLLDK 60
SLTAPEHPEN PVSRQTNAIS AFQMLQELSP YVKFAHFTAN QAILEATEGH REIHVIDFDF 120
MEGIQWPSLM VDLAAREDAS LRITAIVGDK GSSCNIQQTG FRLQDFANSI NLSFSSDQVL 180
IKKEEDFEEI KVGHTLIANC MINQLHMPHR ESSLVETFFN GLRKLSPKIL VFVQEELFSF 240
SKAPSTSFAG FFCEALDHYT ALSDSLRSGF FGGYKLALKI IEREFLRMQI LDSVKHFPCG 300
IMGNESNMLP DYPSMNGFRP IPMNSCNVIQ AKHLISLFNG SYWVQNE*
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