PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cc02_g18860
Common NameGSCOC_T00014443001
Organism
Coffea canephora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
Family bZIP
Protein Properties Length: 432aa    MW: 46034.7 Da    PI: 10.097
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cc02_g18860genomeCGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.28.5e-14353405557
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                  +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+  el ++ +
  Cc02_g18860 353 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKELNEELQKKQVELMEMQK 405
                  5789999************************************9999998865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-11349413IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841351402IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-13353403No hitNo description
SuperFamilySSF579598.44E-10353402No hitNo description
PfamPF001709.0E-12353405IPR004827Basic-leucine zipper domain
PROSITE patternPS000360356371IPR004827Basic-leucine zipper domain
CDDcd147076.22E-23358407No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MGSCLNFDNT GNITQPEGNV GRPGGNFPLA RQSSIYSMTF GELQTFGSLG KDFGSMNMED  60
LLKNIWTAEE TQVNATVERN GTTPAGNLQR QGSLTLPRTL SQRTVDEVWK DLFSGGAKDG  120
SGGGSSNLVP REPTLGEMTL EEFLVRAGVV REDAQPTGKA SNGGFYAGLV QSGGIDNGLN  180
IGFQQLARDQ GVLGNQMAKS KNALSNPSNL ILNGDGVRSS QQQQNQQPPL QPLFPKQATV  240
AFASSLPLGN SVQQIGNNAQ LASPGPNASV VGMTTAASTV AQGGVAPTGV MGIAGLRGVT  300
TAAAGGSPGN HLHSDVISKS SLDSPSLSPS PYAFNEAGRG RRSSSTLEKQ VERRRRRMIK  360
NRESAARSRA RKQAYTLELE AEVAKLKELN EELQKKQVEL MEMQKNQMLE TMEMPWGGKR  420
RCLRRTLTGP W*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00038PBMTransfer from AT4G34000Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027105950.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 7 isoform X1
RefseqXP_027105951.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 7 isoform X1
RefseqXP_027105952.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 7 isoform X1
TrEMBLA0A068TMJ80.0A0A068TMJ8_COFCA; Uncharacterized protein
STRINGXP_009791697.11e-155(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.22e-64abscisic acid responsive elements-binding factor 3