PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cc02_g15790
Common NameGSCOC_T00014041001
Organism
Coffea canephora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
Family BES1
Protein Properties Length: 296aa    MW: 31451 Da    PI: 8.4669
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cc02_g15790genomeCGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822212.69.8e-6621451148
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc+eAGwvve+DGttyrkg+kp e+++++g sa++sp+ss+q   
  Cc02_g15790   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGCKPAERMDIIGGSATMSPCSSYQ--- 96 
                  5899*******************************************************************************************... PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                       +sp  sy++sp+sssfpsp+s+  + +a+     +sl+p+l++ls+ ss
  Cc02_g15790  97 -----PSPGVSYNPSPSSSSFPSPVSSHYAANANGsadaNSLIPWLKNLSSGSS 145
                  .....9******************9988776665567779********998544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.1E-663141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCNEAG  60
WVVEEDGTTY RKGCKPAERM DIIGGSATMS PCSSYQPSPG VSYNPSPSSS SFPSPVSSHY  120
AANANGSADA NSLIPWLKNL SSGSSPASSK LPHHIYIPGG SISAPQYAFL PSSTPPSPSR  180
QTPPDSGWLS GVQTPQDGPS SPTFSLVASN PFGIKEPLSN GGSRMWTPGQ SGACSPAIAA  240
GFDQTADVPM ADAVSAEFAF GNSTKGLVKP WEGERIHEEF VSDDLELTLG NSKTR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027111979.11e-173BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_027111980.11e-173BES1/BZR1 homolog protein 4-like isoform X2
RefseqXP_027161672.11e-173BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_027161674.11e-173BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-121BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A068TKP20.0A0A068TKP2_COFCA; Uncharacterized protein
STRINGXP_009590977.11e-147(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18890.12e-96BES1/BZR1 homolog 3