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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10025567m |
Common Name | CICLE_v10025567mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
GRAS |
Protein Properties |
Length: 460aa MW: 51457 Da PI: 6.1502 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10025567m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 308.7 | 1.4e-94 | 53 | 455 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.....fsevsPi 90
++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+ f++AL +r a+ s+++k l++ ++++ n + + + +++ f++++P+
Ciclev10025567m 53 EQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALITRAAK--SGTCKMLAAMANAHCNLVVHNHKFSVielasFVDLTPW 144
79****************************************************..8888888888887777444444443334488******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl 181
++f++ +aN aIleav+g++ vHi+D+++++++Q p+L++a+a+R egpp+l++T+ g+ e + ++ee+g +L +fA++ +v +ef+v+
Ciclev10025567m 145 HRFGFTAANAAILEAVDGCSVVHIVDLSLTHCMQIPTLIDAIANRFEGPPRLKLTVAGATEDVppmLDLSYEELGTKLVNFARSRNVMLEFRVI 238
***********************************************************887798888999*********************** PP
GRAS 182 .......vakrledleleeLrvkp.gEalaVnlvlqlhrll....................desvsleserdevLklvkslsPkvvvvveqead 247
a+ +e++++++L + gEal++n++++lh+++ +s+s++ r+ +Lk+++sl+P++vv+v+++ad
Ciclev10025567m 239 pssyadgFASLIEQMRVQQLVYAEsGEALVINCHMMLHYIPeetlnpsttfsslnpysleyYSSTSIS-LRSMFLKAIRSLEPTIVVLVDEDAD 331
9997766666777778888877779**********************************964444444.488********************** PP
GRAS 248 hnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll 341
+++++++ r+ +a++y + +d +++ lpr s++r ++E++ + ++++nv+a+eg +r+er e +++W +r+++a F+ ++++e+a+++ k++l
Ciclev10025567m 332 LTANNLVCRLRSAFNYLWIPYDLVDTFLPRGSKQREWYEAA-VCWKVENVIAHEGLQRVERLEPKSRWVQRMRNANFRGITFGEEAVSELKTML 424
*****************************************.99************************************************** PP
GRAS 342 rkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+++ g+ +++e++ lvl+Wk+++ v++SaW
Ciclev10025567m 425 DEHA-AGWGLKKEEDDLVLTWKGHNAVFASAW 455
****.8999*********************** PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 460 aa
Download sequence Send
to blast |
MMQFTETPPP PLHQISSFSN FTMNKNQIHR TRPWPGFPSS KSFASFGDAN CMEQLLVHCA 60 NAIESNDATL AQQILWVLNN IAPPDGDSNQ RLTCAFLRAL ITRAAKSGTC KMLAAMANAH 120 CNLVVHNHKF SVIELASFVD LTPWHRFGFT AANAAILEAV DGCSVVHIVD LSLTHCMQIP 180 TLIDAIANRF EGPPRLKLTV AGATEDVPPM LDLSYEELGT KLVNFARSRN VMLEFRVIPS 240 SYADGFASLI EQMRVQQLVY AESGEALVIN CHMMLHYIPE ETLNPSTTFS SLNPYSLEYY 300 SSTSISLRSM FLKAIRSLEP TIVVLVDEDA DLTANNLVCR LRSAFNYLWI PYDLVDTFLP 360 RGSKQREWYE AAVCWKVENV IAHEGLQRVE RLEPKSRWVQ RMRNANFRGI TFGEEAVSEL 420 KTMLDEHAAG WGLKKEEDDL VLTWKGHNAV FASAWVPAA*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, leaves and flowers. {ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |