PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ciclev10003845m | ||||||||
Common Name | CICLE_v10003845mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bZIP | ||||||||
Protein Properties | Length: 185aa MW: 20434.9 Da PI: 8.1731 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.8 | 1.1e-08 | 151 | 173 | 4 | 26 |
XCHHHCHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKka 26 ++r +r++kNRe+A rsR+RK++ Ciclev10003845m 151 DRRHKRMMKNRESAARSRARKQE 173 789*******************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd14707 | 1.24E-13 | 152 | 173 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.4E-5 | 152 | 173 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 155 | 170 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MEEVWQDISL TSLQDHANTA IPNTTGIPNT SAALIFQDFF ARPFNKDPPI TKASPAAHPS 60 TAEPSNSSCF GNLAPHHGGA LLSLNSGSGF NYLENVPAPL AHHHQRPSHQ LLQGFPLNNC 120 NSPFDDALAP AHVVSSICFK RPQEHEGHLT DRRHKRMMKN RESAARSRAR KQEPHFLFFP 180 PLFY* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006435229.2 | 1e-125 | bZIP transcription factor 27 | ||||
TrEMBL | V4V8I4 | 1e-133 | V4V8I4_9ROSI; Uncharacterized protein | ||||
STRING | XP_006435229.1 | 1e-134 | (Citrus clementina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1934 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 8e-13 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Ciclev10003845m |
Entrez Gene | 18041742 |