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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10003213m |
| Common Name | CICLE_v10003213mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
GRAS |
| Protein Properties |
Length: 480aa MW: 55244.7 Da PI: 7.0225 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10003213m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 307.6 | 2.9e-94 | 93 | 476 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
l++lLl A+a ++++ +la + L++l +++s +gd++qR++a+f+ +Laarl+ s y+ ++ ++t+ +ee+ a++ ++ vsP+++++
Ciclev10003213m 93 LIHLLLITATAADENNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTE----EEEFLAFTDLYRVSPYFQLA 182
689****************************************************99****999888886....788888899*********** PP
GRAS 95 hltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnv 180
h+taNqaIlea+e++ +++H+iDfd+s+G+QWp+L+q+L++++ ++ s+RiTg+g+ s eel+et++rL +f +++ ++ fef+
Ciclev10003213m 183 HFTANQAILEAFEEQiennnRALHVIDFDVSYGFQWPSLIQSLSEKAtnGNRISFRITGFGR----SIEELQETENRLVSFSKSFrNLVFEFQG 272
************99888887899**********************99745555*********....9*****************857******* PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
l + +l ++r k++E++a nlv++l +l ++ ++++L+lv+s++P++v++veqe +++ +Fl rf+e+l+y++a+fdsl+
Ciclev10003213m 273 L----IRGSRLVNIRKKKHETVAANLVFHLNTLK-IYLK----ISDTLNLVRSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLDDC 357
7....55566679999**************9997.3333....367************************************************ PP
GRAS 275 lpreseerikvErellgreivnvvacegaerre......rhetlekWrerleeaGFkpvplsekaakqaklllr............kvksdgyr 350
lp+es++r ++E+ +lg+ei++++ c +++ + r e++e+W++r+e+ GF+ +++s+k qaklll+ + +++g++
Ciclev10003213m 358 LPQESNKRLSIEKNYLGKEIKSMLNCDESDNGKydnyypRYERMETWKARMESHGFSGIKMSSKSLIQAKLLLKirthycplqfdeENNNNGFK 451
**************************998854333444499*******************************9743333333222233467888 PP
GRAS 351 veee.sgslv.lgWkdrpLvsvSaW 373
v e+ +g ++ lgW+dr L+++SaW
Ciclev10003213m 452 VFERdDGKAIsLGWQDRCLLTASAW 476
86544677778************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 480 aa
Download sequence Send
to blast |
MEDTEEEEEF LALRLAIVAS DSCSVDKQRK RKRITRVSLN SSNISPYHHE GCCVSEGKIF 60
RLLQMREQML KLDHKRKGVV DEDGNNNNKG LHLIHLLLIT ATAADENNVS LALENLTELY 120
QTVSLTGDSV QRVVAHFADG LAARLLTRRS PFYEMITKQP TEEEEFLAFT DLYRVSPYFQ 180
LAHFTANQAI LEAFEEQIEN NNRALHVIDF DVSYGFQWPS LIQSLSEKAT NGNRISFRIT 240
GFGRSIEELQ ETENRLVSFS KSFRNLVFEF QGLIRGSRLV NIRKKKHETV AANLVFHLNT 300
LKIYLKISDT LNLVRSIKPT IVTLVEQEGS RSPRNFLSRF MESLHYFAAM FDSLDDCLPQ 360
ESNKRLSIEK NYLGKEIKSM LNCDESDNGK YDNYYPRYER METWKARMES HGFSGIKMSS 420
KSLIQAKLLL KIRTHYCPLQ FDEENNNNGF KVFERDDGKA ISLGWQDRCL LTASAWHCV*
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